The Best Hotels Closest to San Diego Natural History Museum in San Diego for 2026

The entrance to the Natural History Museum with a grand staircase leading up to the doors.

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Our top choices for San Diego Natural History Museum hotels

A hotel room with a herringbone-patterned floor, a bed, a chair, and curtains with room numbers.

A modern conference room with a wooden floor, white chairs, and a long table.

A modern office space with a reception desk, seating area, and plants.

A modern lounge area with a blue sofa, yellow armchair, and a coffee table with a book and a potted plant.

1. Stay Classy Hostel

East Village, 2.3 km from San Diego Natural History Museum

Andrew

NT$1,720

NT$1,957 total

includes taxes & fees

Oct 5 - Oct 6

A narrow, enclosed walkway with wooden railings and a metal grid barrier, leading to a building entrance.

A modern interior with concrete walls, wooden beams, and a central planter with plants.

An outdoor seating area with sofas and chairs, a wooden staircase, and potted plants.

A modern bedroom with a large bed, a nightstand, a wall-mounted lamp, and a window with curtains.

2. City24 Hotel Little Italy Mission Hills

2.3 km from San Diego Natural History Museum

Mike

NT$3,693

NT$5,247 total

includes taxes & fees

Oct 26 - Oct 27

A modern bedroom with a brick wall, a bed, a desk, and a seating area.

A modern living room with a brick wall, a flat-screen TV, a round red rug, and a seating area with a sofa and chairs.

A building entrance with a large arched doorway, the number 432 above it, and a brick-paved area in front.

A cafe with outdoor seating, a sign reading "INFUSED DRINKS NATURE'S KITCHEN," and a "BREAKFAST @ Cafe21" sign.

3. Keating Hotel By At Mine Hospitality

East Village, 2.3 km from San Diego Natural History Museum

Jessica

NT$1,406

NT$4,100 total

includes taxes & fees

Oct 5 - Oct 6

A rooftop pool with lounge chairs and a city skyline in the background.

A modern building with a sign reading "kasa little Italy" and a glass entrance.

A modern lobby with seating areas, large windows, and indoor plants.

A high-rise building with a view of a harbor and sailboats.

4. Kasa Little Italy San Diego

2.3 km from San Diego Natural History Museum

Jeremy

NT$6,882

NT$10,637 total

includes taxes & fees

Oct 5 - Oct 6

A bar area with a glass ceiling, a central bar counter, and multiple stools.

A luxurious interior with a large chandelier, patterned sofas, and a view of a cityscape through a large window.

A dimly lit room with patterned walls, a wooden table, and a chair.

A large swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a building with a striped facade.

5. Lafayette Hotel & Club

2.6 km from San Diego Natural History Museum

Bryanna

NT$8,539

NT$9,815 total

includes taxes & fees

Oct 5 - Oct 6

A high-rise hotel with multiple floors, a prominent sign at the top, and a well-lit facade.

A modern lobby with seating areas, a reception desk, and a sign indicating elevators to parking and a street.

A spacious lobby with a high ceiling, leather seating, multiple tables, and a large flat-screen TV mounted on the wall.

A spacious bar/lounge area with leather seating, a bar counter, and hanging pendant lights.

6. Marriott Vacation Club®, San Diego

1.8 km from San Diego Natural History Museum

Veronica Dangerfield

NT$5,926

NT$6,871 total

includes taxes & fees

Oct 25 - Oct 26

A luxurious room with a grand piano, plush blue sofas, ornate chandeliers, and elegant decor.

A rooftop terrace with white sofas, a fountain, and potted plants.

A luxurious lobby with a grand chandelier, plush blue sofas, and ornate decor.

A luxurious room with ornate chandeliers, a grand staircase, and plush seating.

7. Westgate Hotel

2.3 km from San Diego Natural History Museum

Chris

NT$5,389

NT$7,357 total

includes taxes & fees

Oct 25 - Oct 26

A spacious dining area with high ceilings, large chandeliers, and a modern interior design.

A rooftop pool area with lounge chairs and a view of the building's brick facade.

An outdoor dining area with wicker furniture and potted plants.

A bar area with a high ceiling, patterned wall, and seating.

8. Pendry San Diego

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Halil

NT$9,399

NT$12,645 total

includes taxes & fees

Oct 27 - Oct 28

A modern bar area with a curved counter, multiple bar stools, and a large window offering a view of the cityscape.

A spacious lobby with a high ceiling, a large sectional sofa, multiple seating areas, and a modern chandelier.

A rooftop lounge area with outdoor seating, a pool, and umbrellas.

An outdoor patio area with seating arrangements, including sofas, chairs, and round tables.

9. Omni San Diego Hotel at the Ballpark

Gaslamp Quarter, 3 km from San Diego Natural History Museum

Crystal

NT$8,381

NT$11,158 total

includes taxes & fees

Oct 5 - Oct 6

A restaurant with outdoor seating, brick walls, and decorative lighting.

A vintage car parked in front of a building with a sign that reads "Horton Grand Hotel."

A spacious lobby with a high ceiling, large windows, and a central chandelier.

A spacious lobby with high ceilings, large windows, and elegant furniture.

10. The Horton Grand, Downtown/Gaslamp Quarter

2.8 km from San Diego Natural History Museum

Ross

NT$4,899

NT$6,567 total

includes taxes & fees

Oct 25 - Oct 26

A hotel entrance with a stone archway, multiple windows, and potted plants.

A cozy lounge area with wooden furniture, a fireplace, and lush tropical plants.

A variety of potted plants, including cacti and other greenery, arranged in front of a building with large windows.

A modern bedroom with a large bed, a decorative headboard, a nightstand, and a view of the city through large windows.

11. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Tamara

NT$6,340

NT$7,351 total

includes taxes & fees

Oct 14 - Oct 15

A rooftop lounge with a view of the city and ocean, featuring a sofa, chairs, and round tables.

A harbor with boats, a large building, and a parking area.

A dining area with round tables set for a formal event, large windows offering a view of the city, and elegant floral arrangements.

A modern hotel with a prominent yellow and blue facade, large windows, and a well-lit entrance area with palm trees.

12. Springhill Suites San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Bonnie

NT$5,385

NT$6,258 total

includes taxes & fees

Oct 25 - Oct 26

A hotel room with two beds, a large mirror, a wooden headboard, and a carpeted floor.

A narrow alleyway with yellow buildings, a palm tree, and windows.

A hotel with a modern design, featuring a prominent 'Hotel Z' sign, a staircase, and a large window.

A modern interior with a seating area, a bookshelf, and a view through large windows.

13. Hotel Z

Gaslamp Quarter, 2.6 km from San Diego Natural History Museum

Tiffany

NT$4,408

NT$6,218 total

includes taxes & fees

Oct 5 - Oct 6

A multi-level interior with a staircase, wooden doors, and a balcony with plants.

A kitchen area with stainless steel appliances, a coffee machine, and a counter with various kitchen tools.

An outdoor dining area with tables and orange umbrellas, surrounded by buildings including the WM. PENN HOTEL.

A kitchen area with stainless steel appliances, a coffee machine, and a variety of kitchen utensils. There is a sign above the counter that reads "gaslamp hostel SAN DIEGO".

14. Gaslamp Hostel

Gaslamp Quarter, 2.4 km from San Diego Natural History Museum

Karin

NT$3,364

NT$3,826 total

includes taxes & fees

Nov 3 - Nov 4

A modern interior with a round table, two chairs, a hanging lamp, and a view of urban buildings through large windows.

A modern kitchen with a built-in washer, a coffee maker, and a large window with a view of buildings.

A modern interior with a long wooden table, blue bar stools, a sofa, and large windows offering a view of the street.

A modern hotel room with a bed, a sofa, a dining area, and a kitchen.

15. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

East Village, 2.5 km from San Diego Natural History Museum

Heather

NT$5,460

NT$7,439 total

includes taxes & fees

Oct 25 - Oct 26

An aerial view of a resort with multiple swimming pools, lounge areas, and palm trees.

A modern hotel with a prominent circular tower and a glass facade.

A marina with numerous boats docked, a large ship in the background, and a modern building with balconies.

An outdoor patio area with tables and chairs, a fire pit, and string lights.

16. Marriott Marquis San Diego Marina

3.1 km from San Diego Natural History Museum

Thomas Roy

NT$9,080

NT$12,034 total

includes taxes & fees

Oct 25 - Oct 26

A rooftop terrace with outdoor seating, a view of the city, and a large window overlooking the harbor.

A hotel room with a large window offering a city view, a beige sofa with a red pillow, a floor lamp, and a small white table.

A hotel room with a large window offering a view of a marina with boats and a cityscape.

17. Residence Inn by Marriott San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Vasiliy

NT$9,050

NT$10,488 total

includes taxes & fees

Oct 25 - Oct 26

A modern bar area with a circular bar, multiple stools, and a large screen.

A Hard Rock Hotel with a prominent Hard Rock Cafe sign, a large marquee, and a modern building facade.

An outdoor dining area with tables and chairs, a menu stand, and a view of a street with palm trees and a building in the background.

18. Hard Rock Hotel San Diego

Gaslamp Quarter, 2.9 km from San Diego Natural History Museum

Lizet De Luna

NT$5,237

NT$7,610 total

includes taxes & fees

Nov 3 - Nov 4

A grand lobby with marble floors, a chandelier, and ornate doors.

A hotel room with a large bed, a window with blinds, a bedside table with a lamp, and a framed picture on the wall.

A rooftop terrace with outdoor seating, umbrellas, and a view of the city skyline.

A grand lobby with marble floors, ornate chandeliers, and a seating area with patterned upholstery.

19. Gaslamp Plaza Suites

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Matthew

NT$4,429

NT$5,038 total

includes taxes & fees

Oct 5 - Oct 6

A cityscape at dusk with high-rise buildings and a bridge in the distance.

A high-rise hotel with multiple floors, a prominent entrance, and a view of the surrounding cityscape and waterfront.

A modern bar area with a curved counter, bar stools, and a seating area with tables and chairs.

A rooftop pool area with lounge chairs and umbrellas, surrounded by modern buildings and a cityscape at sunset.

20. Courtyard by Marriott San Diego Downtown Little Italy

Little Italy, 2 km from San Diego Natural History Museum

Shumaila

NT$5,420

NT$6,284 total

includes taxes & fees

Oct 25 - Oct 26

View all properties

Compare popular hotels close to San Diego Natural History Museum

Property	Property class	Guest rating
Stay Classy Hostel	9.6 Exceptional 967 reviews	View
City24 Hotel Little Italy Mission Hills	9.6 Exceptional 219 reviews	View
Keating Hotel By At Mine Hospitality	9.4 Exceptional 192 reviews	View
Kasa Little Italy San Diego	9.6 Exceptional 540 reviews	View
Lafayette Hotel & Club	9.4 Exceptional 2,047 reviews	View

Top San Diego Natural History Museum Hotel Reviews

Hard Rock Hotel San Diego

10/10 Excellent

"Clean and modern. Great location and staff."

Wyndham San Diego Bayside

10/10 Excellent

"We stay here every year for the festival that happens across the street at the waterfront park. Close, convenient and has great views all around. Beds are comfortable, staff is plenty nice. There may have been a miscommunication about the view I wanted, but I didn’t want to complain so I accepted my fate with the view we got. It was still beautiful. I love having the restaurants downstairs, steak and eggs for breakfast from claim jumpers was amazing. Such a great way to fuel up before the festival then we headed out. I will say, the $50 a day for parking is quite a stretch, especially when staying multiple days and there being no elevator for the roof of the parking structure. Taking our luggage down was fine, but I then leaving I drove my car to the bottom level and packed up from there. Overall, great experience and we will be returning next year for the same event :)"

Courtyard by Marriott San Diego Downtown Little Italy

10/10 Excellent

"Such a nice place and parking usually available in structure. Convenient location to spend weekend in Little Italy and able to walk to most places. The bar is nice and staff have been friendly as well as helpful to point out discounts for partnering restaurants."

The DEXTRO Little Italy, BW Premier Collection

10/10 Excellent

"No"

Keating Hotel By At Mine Hospitality

8/10 Good

"Amazing location! Heart of the Gaslamp! And only 2 blocks from main bus lines. Easy for non-locals to take the city bus from airport. Super basic room but had everything we needed. I read other reviews before we stayed so knew what to expect (loud at night) but the earplugs on the night stands still made me laugh! And we used them!! The front desk has limited hours but the staff was attentive and checked in over text messages so it felt like they were always available, even if we didn’t see them in the lobby."

The Neon Elm Hotel

8/10 Good

"Cool building. Way too many messages and comms which I had to access through a third party vendor. That said, I didn't get my door code until after check-in time."

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

10/10 Excellent

"We had a great stay! The room had a charming Parisian feel—compact and studio-style, but completely modern and spotlessly clean."

Other attractions near San Diego Natural History Museum

Fleet Science Center

Discover science through exhibits that will delight the entire family. Watch an IMAX film at San Diego’s museum and planetarium.

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A blue sign with yellow text reading "SPANISH ART CENTER" above a tiled wall.

Spanish Village Art Center

Enjoy an outing to Spanish Village Art Center during your stay in San Diego. Discover the area's top-notch restaurants and its acclaimed theater scene.

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A detailed model of a town with a church, train tracks, and a bridge.

San Diego Model Railroad Museum

You can spend time studying the exhibits at San Diego Model Railroad Museum in San Diego. Stroll along the area's seaside or experience its fascinating museums.

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A symmetrical garden with a central reflecting pool, palm trees, and classical architecture.

Casa de Balboa

You can learn about the history of San Diego when you stop by Casa de Balboa. Stroll along the area's beautiful beaches or experience its fascinating museums.

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A gallery with classical paintings on display.

Museum of Photographic Arts

Visit this museum to journey through the history of the photography medium, which both captures the real world and transforms it into art.

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A desert landscape with large cacti and sparse trees.

Desert Garden

No other garden is as natural to San Diego as this slightly secluded area. Stroll through this green space to see plant species not commonly found in other parks.

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A garden with a pond, colorful flowers, palm trees, and a large building with a dome.

Botanical Building

Discover thousands of plants inside the historic centerpiece of San Diego’s Balboa Park, which was originally built for the 1915 Panama–California Exposition.

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An art gallery with pink walls and ceiling, featuring classical paintings and a central table.

Timken Museum of Art

View a priceless collection of masterpieces from Europe, the U.S. and Russia in this gorgeous community museum, known as San Diego’s jewel box of art.

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Frequently asked questions

What's the area like around San Diego Natural History Museum?

San Diego Natural History Museum is located in an area of San Diego known for its beautiful ocean views, array of dining options, and popular zoo. If you're looking for a convenient place to stay, check out the 102 hotels and other accommodations you'll find within a mile.

What's the best place to stay close to San Diego Natural History Museum?

The Neon Elm Hotel is one of the top choices for your stay based on our traveler data, and this hotel offers free WiFi and in-room refrigerators. It's located just a short 1 mi (1.5 km) from San Diego Natural History Museum. Other good choices within a few miles include Wyndham San Diego Bayside and Best Western Seven Seas.

How many hotels can I expect to find near San Diego Natural History Museum?

Expedia has 102 hotels and other accommodations within a mile from San Diego Natural History Museum.

If I need to cancel the hotel reservation for my stay near San Diego Natural History Museum, will I receive a refund?

Yes! The majority of room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, you might still have the option to cancel and be given a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then use the "fully refundable" filter to review the best deals near San Diego Natural History Museum.

Where can I learn more about changing or cancelling my trip in the area near San Diego Natural History Museum?

To find more details about picking new dates or cancelling your stay near San Diego Natural History Museum, go to https://www.expedia.com/service/.

What can I see and do near San Diego Natural History Museum?

San Diego Air and Space Museum, Maritime Museum of San Diego, and USS Midway Museum feature a variety of fascinating exhibits to see while you're in town. Explore landmarks like Hotel del Coronado, Mission Basilica San Diego de Alcala, and Casa de Balboa. You can check out the local talent at Old Globe Theater, San Diego Civic Theatre, and The Rady Shell at Jacobs Park.

Find hotels near San Diego Natural History Museum, San Diego from NT$1,957

Change your mind

Treat yourself

Be picky

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for San Diego Natural History Museum hotels

1. Stay Classy Hostel

2. City24 Hotel Little Italy Mission Hills

3. Keating Hotel By At Mine Hospitality

4. Kasa Little Italy San Diego

5. Lafayette Hotel & Club

6. Marriott Vacation Club®, San Diego

7. Westgate Hotel

8. Pendry San Diego

9. Omni San Diego Hotel at the Ballpark

10. The Horton Grand, Downtown/Gaslamp Quarter

11. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

12. Springhill Suites San Diego Downtown/Bayfront

13. Hotel Z

14. Gaslamp Hostel

15. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

16. Marriott Marquis San Diego Marina

17. Residence Inn by Marriott San Diego Downtown/Bayfront

18. Hard Rock Hotel San Diego

19. Gaslamp Plaza Suites

20. Courtyard by Marriott San Diego Downtown Little Italy

Compare popular hotels close to San Diego Natural History Museum

Top San Diego Natural History Museum Hotel Reviews

Hard Rock Hotel San Diego

Wyndham San Diego Bayside

Courtyard by Marriott San Diego Downtown Little Italy

The DEXTRO Little Italy, BW Premier Collection

Keating Hotel By At Mine Hospitality

The Neon Elm Hotel

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

Other attractions near San Diego Natural History Museum

Fleet Science Center

Spanish Village Art Center

San Diego Model Railroad Museum

Casa de Balboa

Museum of Photographic Arts

Desert Garden

Botanical Building

Timken Museum of Art

Frequently asked questions

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