The Best Hotels Closest to San Diego Natural History Museum in San Diego for 2026

The entrance to the Natural History Museum with a grand staircase leading up to the doors.

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Our top choices for San Diego Natural History Museum hotels

A hotel room with a herringbone-patterned floor, a bed, a chair, and curtains with room numbers.

A modern conference room with a wooden floor, white chairs, and a long table.

A modern office space with a reception desk, seating area, and plants.

1. Stay Classy Hostel

East Village, 2.3 km from San Diego Natural History Museum

Wai Kit

NT$1,709

NT$1,944 total

includes taxes & fees

Sep 3 - Sep 4

A narrow, enclosed walkway with wooden railings and a metal grid barrier, leading to a building entrance.

An outdoor seating area with sofas and chairs, a wooden staircase, and potted plants.

A modern reception desk with a glass top, a large window offering a view, and a potted plant.

A modern bedroom with a large bed, a nightstand, a wall-mounted lamp, and a window with curtains.

2. City24 Hotel Little Italy Mission Hills

2.3 km from San Diego Natural History Museum

omokayode

NT$3,528

NT$5,055 total

includes taxes & fees

Sep 8 - Sep 9

A modern bedroom with a brick wall, a bed, a desk, and a seating area.

A modern bathroom with a sink, mirror, and a bed with a red pillow.

A cafe with outdoor seating, a sign reading "INFUSED DRINKS NATURE'S KITCHEN," and a "BREAKFAST @ Cafe21" sign.

A building entrance with a large arched doorway, the number 432 above it, and a brick-paved area in front.

3. Keating Hotel By At Mine Hospitality

East Village, 2.3 km from San Diego Natural History Museum

Khoi

NT$1,916

NT$4,663 total

includes taxes & fees

Sep 8 - Sep 9

A rooftop pool with lounge chairs and a city skyline in the background.

A high-rise building with a view of a harbor and sailboats.

A modern building with a sign reading "kasa little Italy" and a glass entrance.

A modern lobby with seating areas, large windows, and indoor plants.

4. Kasa Little Italy San Diego

2.3 km from San Diego Natural History Museum

Victor

NT$7,122

NT$10,892 total

includes taxes & fees

Sep 6 - Sep 7

A bar area with a glass ceiling, a central bar counter, and multiple stools.

A checkered floor with round tables and chairs, a patterned ceiling, and large windows.

A luxurious interior with a large chandelier, patterned sofas, and a view of a cityscape through a large window.

A dimly lit room with patterned walls, a wooden table, and a chair.

5. Lafayette Hotel & Club

2.6 km from San Diego Natural History Museum

Edgar

NT$5,916

NT$6,800 total

includes taxes & fees

Sep 9 - Sep 10

A high-rise hotel with multiple floors, a prominent sign at the top, and a well-lit facade.

A lobby with a purple-lit ceiling, a large wall mural, and seating areas.

A modern lobby with seating areas, a reception desk, and a sign indicating elevators to parking and a street.

A spacious bar/lounge area with leather seating, a bar counter, and hanging pendant lights.

6. Marriott Vacation Club®, San Diego

1.8 km from San Diego Natural History Museum

Veronica Dangerfield

NT$5,033

NT$5,835 total

includes taxes & fees

Sep 7 - Sep 8

A luxurious room with a grand piano, plush blue sofas, ornate chandeliers, and elegant decor.

A luxurious room with ornate chandeliers, a grand staircase, and plush seating.

A rooftop terrace with white sofas, a fountain, and potted plants.

A fountain with multiple water jets in a courtyard with seating and potted plants.

7. Westgate Hotel

2.3 km from San Diego Natural History Museum

Chris

NT$5,984

NT$8,039 total

includes taxes & fees

Sep 3 - Sep 4

A spacious dining area with high ceilings, large chandeliers, and a modern interior design.

A bar area with a high ceiling, patterned wall, and seating.

A rooftop pool area with lounge chairs and a view of the building's brick facade.

An outdoor dining area with wicker furniture and potted plants.

8. Pendry San Diego

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Melinda

NT$9,338

NT$12,562 total

includes taxes & fees

Sep 27 - Sep 28

A restaurant with outdoor seating, brick walls, and decorative lighting.

A spacious lobby with a bar area, seating arrangements, and a large chandelier.

A vintage car parked in front of a building with a sign that reads "Horton Grand Hotel."

A spacious lobby with a high ceiling, large windows, and a central chandelier.

9. The Horton Grand, Downtown/Gaslamp Quarter

2.8 km from San Diego Natural History Museum

Nathaniel

NT$4,392

NT$5,973 total

includes taxes & fees

Sep 7 - Sep 8

A multi-level interior with a staircase, wooden doors, and a balcony with plants.

A kitchen area with stainless steel appliances, a coffee machine, and a counter with various kitchen tools.

A hotel lobby with a blue patterned carpet, a green leather sofa, a red leather sofa, and a wooden railing with plants.

An outdoor dining area with tables and orange umbrellas, surrounded by buildings including the WM. PENN HOTEL.

10. Gaslamp Hostel

Gaslamp Quarter, 2.4 km from San Diego Natural History Museum

Karin

NT$3,413

NT$3,882 total

includes taxes & fees

Sep 6 - Sep 7

A modern bar area with a curved counter, multiple bar stools, and a large window offering a view of the cityscape.

A spacious lobby with large windows, curved ceiling, and comfortable seating areas.

A rooftop lounge area with outdoor seating, a pool, and umbrellas.

A spacious lobby with a high ceiling, a large sectional sofa, multiple seating areas, and a modern chandelier.

11. Omni San Diego Hotel at the Ballpark

Gaslamp Quarter, 3 km from San Diego Natural History Museum

katrice

NT$5,292

NT$7,568 total

includes taxes & fees

Sep 7 - Sep 8

A rooftop lounge with a view of the city and ocean, featuring a sofa, chairs, and round tables.

A dining area with round tables set for a formal event, large windows offering a view of the city, and elegant floral arrangements.

A modern hotel with a prominent yellow and blue facade, large windows, and a well-lit entrance area with palm trees.

A cruise ship docked at a port with a large shipyard and military vessel in the background.

12. Springhill Suites San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Bonnie

NT$6,521

NT$7,573 total

includes taxes & fees

Sep 20 - Sep 21

A hotel entrance with a stone archway, multiple windows, and potted plants.

A modern bedroom with a large bed, a decorative headboard, a nightstand, and a view of the city through large windows.

A variety of potted plants, including cacti and other greenery, arranged in front of a building with large windows.

A cozy lounge area with wooden furniture, a fireplace, and lush tropical plants.

13. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Aaron

NT$5,982

NT$6,936 total

includes taxes & fees

Sep 7 - Sep 8

A narrow hotel room with a kitchenette, a dining area, and a bed.

A modern living room with a black leather sofa, a black armchair, a wooden coffee table with a plant, and a bench.

A modern kitchen with white cabinets, a microwave, and a refrigerator. There is a dining area with a wooden table set for four, including plates, glasses, and cutlery.

A modern living room with a wooden floor, a dining area, a sofa, a TV, and a large window with curtains.

14. The Artifact Inn

East Village, 2.3 km from San Diego Natural History Museum

Chris

NT$2,785

NT$7,245 total

includes taxes & fees

Sep 3 - Sep 4

A modern hotel lounge with a view of the sea, featuring sofas, tables, and chairs arranged for guests.

Two wicker chairs with striped cushions on a balcony with a view of the sea.

A modern lobby with a curved sofa, two armchairs, a patterned rug, and a decorative wall panel.

A modern hotel room with a large window, yellow furniture, a white table, and a view of the city and water.

15. InterContinental San Diego by IHG

2.9 km from San Diego Natural History Museum

Eric Michael

NT$7,913

NT$11,305 total

includes taxes & fees

Sep 7 - Sep 8

An outdoor dining area with a long table and chairs, a street view, and a building with a 'P' parking sign.

A multi-story hotel with a modern architectural design, featuring a prominent entrance and a well-lit street view.

A reception area with a brick wall, palm tree artwork, and surfboards on display.

A cozy restaurant with brick walls, wooden tables, and chairs. There are candles on the tables, and a chandelier hangs from the ceiling.

16. Residence Inn by Marriott San Diego Downtown/Gaslamp Quarter

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Linda

NT$3,868

NT$4,485 total

includes taxes & fees

Sep 3 - Sep 4

A grand lobby with marble floors, a chandelier, and ornate doors.

A grand lobby with marble floors, ornate chandeliers, and a seating area with patterned upholstery.

A rooftop terrace with outdoor seating, umbrellas, and a view of the city skyline.

A multi-story building with a prominent corner entrance, multiple windows, and a flag on top.

17. Gaslamp Plaza Suites

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Kathryn

NT$4,020

NT$4,573 total

includes taxes & fees

Sep 3 - Sep 4

A rooftop terrace with outdoor seating, a view of the city, and a large window overlooking the harbor.

A dining area with round tables, chairs, and floral centerpieces.

A hotel room with a large window offering a view of a marina with boats and a cityscape.

18. Residence Inn by Marriott San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Traci

NT$8,089

NT$9,376 total

includes taxes & fees

Sep 29 - Sep 30

A modern interior with a round table, two chairs, a hanging lamp, and a view of urban buildings through large windows.

A modern kitchen with a built-in washer, a coffee maker, and a large window with a view of buildings.

A modern hotel room with a bed, a sofa, a dining area, and a kitchen.

A modern living room with a black leather sofa, two round tables, and a dining table with chairs. A large window offers a view of city buildings.

19. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

East Village, 2.5 km from San Diego Natural History Museum

Heather

NT$4,386

NT$6,187 total

includes taxes & fees

Sep 8 - Sep 9

A modern hotel room with a large bed, a sofa, a TV, and a city view.

A rooftop pool with lounge chairs and umbrellas, a clear sky, and a high-rise building in the background.

A high-rise hotel with multiple floors, a prominent curved glass facade, and a view of a bridge and water body in the background.

A spacious hotel dining area with multiple tables and chairs, large windows, and a view of the outdoors.

20. Manchester Grand Hyatt San Diego

3.1 km from San Diego Natural History Museum

Steven

NT$6,299

NT$9,028 total

includes taxes & fees

Sep 7 - Sep 8

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Compare popular hotels close to San Diego Natural History Museum

Property	Property class	Guest rating
Stay Classy Hostel	9.6 Exceptional 942 reviews	View
City24 Hotel Little Italy Mission Hills	9.6 Exceptional 194 reviews	View
Keating Hotel By At Mine Hospitality	9.4 Exceptional 152 reviews	View
Kasa Little Italy San Diego	9.6 Exceptional 515 reviews	View
Lafayette Hotel & Club	9.4 Exceptional 1,947 reviews	View

Top San Diego Natural History Museum Hotel Reviews

Manchester Grand Hyatt San Diego

10/10 Excellent

"great place"

Omni San Diego Hotel at the Ballpark

10/10 Excellent

"Amazing stay! Clean hotel. Great amenities. Will be staying again if I’m ever in San Diego."

Hard Rock Hotel San Diego

10/10 Excellent

"My room was spectacular and spacious."

San Diego Downtown Lodge

10/10 Excellent

"Great location very accessible price totally work for me . Just they were under construction and it was a bit noisy, over all perfect."

Ash&9th

10/10 Excellent

"parking is $25 to park in the lot but street parking is usually available but is only free after 8pm."

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

10/10 Excellent

"My wife and I stayed for three days. The room reminded me after a Scandinavian style hotel - smaller than a typical American hotel but clean and efficiently layed out. The staff was very nice. Check-in and check-out was extremely quick. The location was just under a mile from Balboa Park, so we could walk or take a cheap Uber with ease. The hotel is in a central area of the city that makes everything we had time to see not very far away. The Hillcrest area has lots of great food choices all within a few blocks. If I make it back to San Diego (which I hope to do) this would be a great place to stay again."

Courtyard by Marriott San Diego Downtown Little Italy

10/10 Excellent

"The area surrounding this hotel was amazing. Saturday farmers market was really nice and the amount of places for eating and shopping within walking distance was great!! The only thing I would warn other about is the parking garage is made for compact cars and the cost was a little much but they have cheaper parking across the street that was much easier for us with a larger vehicle. All in all we had a beautiful trip and the stay was fantastic!!!!"

Keating Hotel By At Mine Hospitality

10/10 Excellent

"Super nice staff, very peaceful, and on the best spot of down town"

Marriott Vacation Club®, San Diego

10/10 Excellent

"great customer service here, didn’t park but luckily there are options nearby. Pretty receptive and had a great breakfast. 10/10 would recommend , will be staying here again."

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Fleet Science Center

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A colorful courtyard with a tiled floor, a bench, and a fountain.

Spanish Village Art Center

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A detailed model of a town with a church, train tracks, and a bridge.

San Diego Model Railroad Museum

You can spend time studying the exhibits at San Diego Model Railroad Museum in San Diego. Stroll along the area's seaside or experience its acclaimed art scene.

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A symmetrical garden with a central reflecting pool, palm trees, and classical architecture.

Casa de Balboa

You can learn about the history of San Diego when you stop by Casa de Balboa. Stroll along the area's beautiful beaches or experience its fascinating museums.

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A gallery with classical paintings on display.

Museum of Photographic Arts

Visit this museum to journey through the history of the photography medium, which both captures the real world and transforms it into art.

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A desert landscape with large cacti and sparse trees.

Desert Garden

No other garden is as natural to San Diego as this slightly secluded area. Stroll through this green space to see plant species not commonly found in other parks.

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A garden with a pond, colorful flowers, palm trees, and a large building with a dome.

Botanical Building

Discover thousands of plants inside the historic centerpiece of San Diego’s Balboa Park, which was originally built for the 1915 Panama–California Exposition.

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An art gallery with pink walls and ceiling, featuring classical paintings and a central table.

Timken Museum of Art

View a priceless collection of masterpieces from Europe, the U.S. and Russia in this gorgeous community museum, known as San Diego’s jewel box of art.

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Frequently asked questions

What's the area like around San Diego Natural History Museum?

San Diego Natural History Museum is located in an area of San Diego known for its beautiful ocean views, array of dining options, and popular zoo. If you're looking for a convenient place to stay, check out the 104 hotels and other accommodations you'll find within a mile.

What's the best place to stay close to San Diego Natural History Museum?

The Neon Elm Hotel is one of the top choices for your stay based on our traveler data, and this hotel offers free WiFi and in-room refrigerators. It's located just a short 1 mi (1.5 km) from San Diego Natural History Museum. Other good choices within a few miles include Wyndham San Diego Bayside and Manchester Grand Hyatt San Diego.

How many hotels can I expect to find near San Diego Natural History Museum?

Expedia has 104 hotels and other accommodations within a mile from San Diego Natural History Museum.

If I need to cancel the hotel reservation for my stay near San Diego Natural History Museum, will I receive a refund?

Yes! The majority of room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, you might still have the option to cancel and be given a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then use the "fully refundable" filter to review the best deals near San Diego Natural History Museum.

Where can I learn more about changing or cancelling my trip in the area near San Diego Natural History Museum?

To find more details about picking new dates or cancelling your stay near San Diego Natural History Museum, go to https://www.expedia.com/service/.

What can I see and do near San Diego Natural History Museum?

San Diego Museum of Art, San Diego Air and Space Museum, and Maritime Museum of San Diego feature a variety of fascinating exhibits to see while you're in town. Explore landmarks like Hotel del Coronado, Mission Basilica San Diego de Alcala, and Casa de Balboa. You can check out the local talent at San Diego Civic Theatre, The Rady Shell at Jacobs Park, and Humphreys Concerts by the Bay.

Find hotels near San Diego Natural History Museum, San Diego from NT$1,944

Change your mind

Treat yourself

Be picky

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for San Diego Natural History Museum hotels

1. Stay Classy Hostel

2. City24 Hotel Little Italy Mission Hills

3. Keating Hotel By At Mine Hospitality

4. Kasa Little Italy San Diego

5. Lafayette Hotel & Club

6. Marriott Vacation Club®, San Diego

7. Westgate Hotel

8. Pendry San Diego

9. The Horton Grand, Downtown/Gaslamp Quarter

10. Gaslamp Hostel

11. Omni San Diego Hotel at the Ballpark

12. Springhill Suites San Diego Downtown/Bayfront

13. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

14. The Artifact Inn

15. InterContinental San Diego by IHG

16. Residence Inn by Marriott San Diego Downtown/Gaslamp Quarter

17. Gaslamp Plaza Suites

18. Residence Inn by Marriott San Diego Downtown/Bayfront

19. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

20. Manchester Grand Hyatt San Diego

Compare popular hotels close to San Diego Natural History Museum

Top San Diego Natural History Museum Hotel Reviews

Manchester Grand Hyatt San Diego

Omni San Diego Hotel at the Ballpark

Hard Rock Hotel San Diego

San Diego Downtown Lodge

Ash&9th

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

Courtyard by Marriott San Diego Downtown Little Italy

Keating Hotel By At Mine Hospitality

Marriott Vacation Club®, San Diego

Other attractions near San Diego Natural History Museum

Fleet Science Center

Spanish Village Art Center

San Diego Model Railroad Museum

Casa de Balboa

Museum of Photographic Arts

Desert Garden

Botanical Building

Timken Museum of Art

Frequently asked questions

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