Find hotels in Ayios Thomas from NT$1,830

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
Dec 28 - Dec 29
Tomorrow
Dec 29 - Dec 30
Next weekend
Jan 2 - Jan 4
In two weeks
Jan 9 - Jan 11

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Ayios Thomas hotels

Deluxe Apartment, Mountain View | Private kitchen | Full-size fridge, oven, stovetop, cookware/dishes/utensils
Kourites Apartments

Kourites Apartments

Kourites Apartments
Faistos
The price is NT$2,111
NT$2,416 total
includes taxes & fees
Dec 28 - Dec 29
Kourites Apartments
Exterior
San Georgio Hotel

San Georgio Hotel

San Georgio Hotel
Minoa Pediada
8.0 out of 10, Very Good, (11)
"Great people, great service, great location, great accommodations. Nothing to complain about. Highly recommend."
United States
Fedor
The price is NT$1,759
NT$2,054 total
includes taxes & fees
Dec 28 - Dec 29
San Georgio Hotel
Beach nearby, sun loungers, beach umbrellas
Triton Authentic Cretan Hotel

Triton Authentic Cretan Hotel

Triton Authentic Cretan Hotel
4.0 star property
Minoa Pediada
8.6 out of 10, Excellent, (9)
"Wir kommen gerne wieder "
Germany
Manuela
The price is NT$3,035
NT$3,558 total
includes taxes & fees
Dec 28 - Dec 29
Triton Authentic Cretan Hotel
Exterior
Delina Mountain Resort

Delina Mountain Resort

Delina Mountain Resort
4.0 star property
Anogia
8.6 out of 10, Excellent, (52)
"Everything about this place is fantastic - The people, the food, the views, the rooms all incredible. "
United Kingdom
Rian
The price is NT$4,545
NT$5,273 total
includes taxes & fees
Jan 25 - 2026/1/26
Delina Mountain Resort
Agapi House | Living area
Traditional Cretan Houses

Traditional Cretan Houses

Traditional Cretan Houses
3.0 star property
Heraklion
8.0 out of 10, Very Good, (68)
"The house was a lovely old Cretan house renovated to a high standard, and Popi was a wonderful, helpful, and knowledgeable host - really friendly and full of suggestions of where to go next. You will need to have a car to get around as it is not at all central, and do not expect a modern building - but it was full of character and the aircon worked very well, so in my eyes it was perfect! I would happily stay here again, and hope to do so some day in the coming years."
United States
Christopher
The price is NT$2,106
NT$2,398 total
includes taxes & fees
Dec 28 - Dec 29
Traditional Cretan Houses
Exterior
Rose Hedge

Rose Hedge

Rose Hedge
Malevizi
The price is NT$3,315
NT$3,848 total
includes taxes & fees
Dec 28 - Dec 29
Rose Hedge
Seasonal outdoor pool, pool umbrellas
ReCrete - Retreat in Crete

ReCrete - Retreat in Crete

ReCrete - Retreat in Crete
Malevizi
The price is NT$12,448
NT$14,190 total
includes taxes & fees
Jan 1 - 2026/1/2
ReCrete - Retreat in Crete
Seasonal outdoor pool, open 8:00 AM to 8:00 PM, sun loungers
Petronikolis Traditional House

Petronikolis Traditional House

Petronikolis Traditional House
Archanes-Asterousia
8.8 out of 10, Excellent, (34)
"The old couple who run the place are awesome. Highly recommend staying here for couple of nights to enjoy village experience in Crete"
United Kingdom
Vivek
Petronikolis Traditional House
Minibar, in-room safe, iron/ironing board, free WiFi
Manili Boutique Suites & Villas

Manili Boutique Suites & Villas

Manili Boutique Suites & Villas
5.0 star property
Archanes-Asterousia
9.6 out of 10, Exceptional, (27)
"Exceptional accommodations in a truly destination village. Great staff, pools everywhere and architecturally a treat! "
United States
David
The price is NT$4,193
NT$4,836 total
includes taxes & fees
Jan 10 - 2026/1/11
Manili Boutique Suites & Villas
Outdoor pool, pool umbrellas, sun loungers
Arolithos Traditional Cretan Village

Arolithos Traditional Cretan Village

Arolithos Traditional Cretan Village
4.0 star property
Malevizi
8.2 out of 10, Very Good, (201)
"Wow! This place was awesome!! The village is excellent for pictures and exploring. The views are amazing, the pool is outstanding, and the staff is wonderful!"
United States
Luz
The price is NT$2,238
NT$2,659 total
includes taxes & fees
Dec 29 - Dec 30
Arolithos Traditional Cretan Village
Junior Suite - Dorippi | In-room safe, desk, iron/ironing board, free WiFi
Inotropes Boutique Suites - Adults Only

Inotropes Boutique Suites - Adults Only

Inotropes Boutique Suites - Adults Only
Archanes-Asterousia
9.6 out of 10, Exceptional, (28)
"An amazing clean apartment with all the necessary features, and easy parking. A lovely place to stay in summer or winter. Highly recommended. "
United Kingdom
Yiannis
The price is NT$2,281
NT$2,609 total
includes taxes & fees
Dec 28 - Dec 29
Inotropes Boutique Suites - Adults Only
View from property
Kalimera Archanes Village

Kalimera Archanes Village

Kalimera Archanes Village
4.0 star property
Archanes-Asterousia
9.8 out of 10, Exceptional, (12)
"Beautiful property with old charm. The house was very comfortable and walking distance to town. "
United States
Olga
The price is NT$3,519
NT$4,107 total
includes taxes & fees
Dec 28 - Dec 29
Kalimera Archanes Village
View from property
Villa Archanes

Villa Archanes

Villa Archanes
Archanes-Asterousia
9.6 out of 10, Exceptional, (46)
"Very pleasant accommodating. stunning property in great location."
Australia
Michael
Villa Archanes
Terrace/patio
ARCĀSA Villas Collection by Omilos Hotels

ARCĀSA Villas Collection by Omilos Hotels

ARCĀSA Villas Collection by Omilos Hotels
Archanes-Asterousia
9.8 out of 10, Exceptional, (6)
"Very nice and clean villa with great and friendly hosts. Great restaurants in the area. Everything was perfect. Thanks a lot Michalis! "
Germany
Christian
The price is NT$3,519
NT$4,144 total
includes taxes & fees
Jan 2 - 2026/1/3
ARCĀSA Villas Collection by Omilos Hotels
Beach nearby, free beach shuttle, 10 beach bars
Arhodiko

Arhodiko

Arhodiko
1.0 star property
Malevizi
7.8 out of 10, Good, (52)
"I like the hotel like home. Cozy and yes not so luxury but very friendly ambiance that, silent. One bus to the airport and to city and near the beach for jog or walk. "
Germany
Erilee
Arhodiko
Beach nearby, sun loungers, beach umbrellas, beach massages
The Santo George Beach Resort

The Santo George Beach Resort

The Santo George Beach Resort
Malevizi
7.4 out of 10, Good, (36)
"Very nice small hotel with newly renovated rooms in a very quite and secure area. Sweet and service minded personnel, working hard to make your holidays at the best! No pool, but just a short walk to a large and beautiful beach with beach bar. We loved this hotel. "
Norway
Richard
The price is NT$1,602
NT$1,880 total
includes taxes & fees
Dec 28 - Dec 29
The Santo George Beach Resort
Exterior
Alsus Boutique Hotel

Alsus Boutique Hotel

Alsus Boutique Hotel
4.0 star property
Malevizi
9.8 out of 10, Exceptional, (22)
"Staff Service Cleanliness Wonderful hosts"
United States
Frederick
The price is NT$2,803
NT$3,210 total
includes taxes & fees
Dec 28 - Dec 29
Alsus Boutique Hotel
Exterior
EcoHeaven Suites

EcoHeaven Suites

EcoHeaven Suites
Malevizi
8.2 out of 10, Very Good, (19)
"It’s was a nice modern hotel "
Canada
Sia
EcoHeaven Suites
Exterior
Villa Agriolive

Villa Agriolive

Villa Agriolive
Hersonissos
The price is NT$8,146
NT$9,269 total
includes taxes & fees
Jan 1 - 2026/1/2
Villa Agriolive
2 outdoor pools, open 10:00 AM to 6:00 PM, pool umbrellas, sun loungers
Petousis Hotel & Suites

Petousis Hotel & Suites

Petousis Hotel & Suites
4.0 star property
Malevizi
9.2 out of 10, Wonderful, (113)
"We had a wonderful stay! And the food at their restaurant below, simply exceptional!"
United States
Emmanuel
Petousis Hotel & Suites
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Ayios Thomas Hotel Reviews

Sofia Hotel

Sofia Hotel

10/10 Excellent
"Friendly staff "
Francisco 1-night trip
Posted 3 days ago
Sofia Hotel

More cheap stays in Ayios Thomas

El Greco Hotel

El Greco Hotel

4, Street 1821 Heraklion Crete Island
The price is NT$1,591 per night from Jan 3 to Jan 4
NT$1,591
NT$1,830 total
Jan 3 - 2026/1/4
includes taxes & fees
7.2/10 Good! (776 reviews)

Frequently asked questions

Where is the best place to stay in Ayios Thomas?
Located 14.5 mi (23.4 km) from the heart of Ayios Thomas, Aquila Atlantis Hotel is a top choice for your stay based on our traveler data. Other good choices for your trip to the area are Agapi Beach Resort - Premium All Inclusive and GDM Megaron Historical Monument Hotel. See all available top hotels, or vacation rentals in Ayios Thomas.
If I need to cancel my hotel reservation in Ayios Thomas, will I receive a refund?
Yes, most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, it may still be possible to cancel it and get a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Ayios Thomas.
Where can I learn more about changing or cancelling my trip to Ayios Thomas?
To find more details about changing or cancelling your trip to Ayios Thomas, head over to our customer service page.
What is the best hotel near Nikos Kazantzakis Airport (HER)?
Sofia Hotel is a popular 3-star hotel featuring free extended parking and a restaurant. It's located a short 0.8 mi (1.2 km) from Nikos Kazantzakis Airport. Other options close to the airport are Pasiphae Hotel and Life Boutique Hotel.
What's it like to stay in Ayios Thomas?
Visitors are sure to enjoy all that Ayios Thomas has to offer. A top sight in the area is Heraklion Port. There are 2669 hotels and other accommodations in the surrounding area. Find out more about Ayios Thomas.
What are the top places to visit in Ayios Thomas?
Heraklion Port is a notable place to visit in the area. You'll also find Shrine at Anemospilia and Knossos Archaeological Site in the area. Check out what more to see and do in Expedia's Ayios Thomas guide.
What's the weather like in Ayios Thomas?
The hottest months are usually July and August with an average temp of 77°F, while the coldest months are January and February with an average of 55°F. Average annual precipitation for Ayios Thomas is 14 inches.