Photo by Mikel Juaristi

Shinjuku 3 Stars Hotels

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check availability on Shinjuku 3 Star Hotels

Our top choices for Shinjuku 3-star hotels

Nippon Seinenkan Hotel

Nippon Seinenkan Hotel
3.5 star property
Shinjuku
9.6 out of 10, Exceptional, (1194)
"Clean, great staff, very nice hotel"
United States
Kwong Wing
The price is NT$3,126
NT$3,438 total
Jan 13 - 2026/1/14
Nippon Seinenkan Hotel

APA Hotel Shinjuku Kabukicho Tower

APA Hotel Shinjuku Kabukicho Tower
3.0 star property
Shinjuku
8.2 out of 10, Very Good, (2760)
"Great stay, locations"
United States
Theingi
The price is NT$2,396
NT$2,899 total
Jan 4 - 2026/1/5
APA Hotel Shinjuku Kabukicho Tower

Apa Hotel Higashi Shinjuku Kabukicho Tower

Apa Hotel Higashi Shinjuku Kabukicho Tower
3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1820)
"Will definitely stay at this hotel again in the future."
Hong Kong SAR China
Glorious
The price is NT$1,933
NT$2,338 total
Jan 6 - 2026/1/7
Apa Hotel Higashi Shinjuku Kabukicho Tower

THE KNOT TOKYO Shinjuku

THE KNOT TOKYO Shinjuku
3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1966)
"Exceptional Stay"
United States
Erica
The price is NT$1,912
NT$2,103 total
Jan 8 - 2026/1/9
THE KNOT TOKYO Shinjuku

Sotetsu Fresa Inn Higashi Shinjuku

Sotetsu Fresa Inn Higashi Shinjuku
3.0 star property
Shinjuku
9.0 out of 10, Wonderful, (1733)
"The staff was very attentive, the room was spotless and breakfasts were delicious."
Canada
Ross
The price is NT$2,463
NT$2,980 total
Jan 4 - 2026/1/5
Sotetsu Fresa Inn Higashi Shinjuku

SOTETSU GRAND FRESA TAKADANOBABA

SOTETSU GRAND FRESA TAKADANOBABA
3.0 star property
Shinjuku
9.4 out of 10, Exceptional, (877)
"Great hotel"
Australia
Carly
The price is NT$2,947
NT$3,242 total
Dec 23 - Dec 24
SOTETSU GRAND FRESA TAKADANOBABA

Nishitetsu Inn Shinjuku

Nishitetsu Inn Shinjuku
3.0 star property
Shinjuku
8.8 out of 10, Excellent, (1000)
"Convenient location"
United States
Wen
The price is NT$2,961
NT$3,257 total
Jan 3 - 2026/1/4
Nishitetsu Inn Shinjuku

WPÜ HOTEL SHINJUKU

WPÜ HOTEL SHINJUKU
3.0 star property
Shinjuku
9.2 out of 10, Wonderful, (1280)
"Nice trendy hotel . Perfect for a solo traveler "
United States
Cassandra
The price is NT$3,407
NT$3,748 total
Dec 15 - Dec 16
WPÜ HOTEL SHINJUKU

Rhodes Kagurazaka Hotel

Rhodes Kagurazaka Hotel
3.0 star property
Shinjuku
7.2 out of 10, Good, (151)
"ALL THE SERVICES WITHIN THE HOTEL WERE EXCELLENT"
United States
cirilo
The price is NT$1,784
NT$1,962 total
Dec 14 - Dec 15
Rhodes Kagurazaka Hotel

JR WEST GROUP VIA INN SHINJUKU

JR WEST GROUP VIA INN SHINJUKU
3.0 star property
Shinjuku
9.2 out of 10, Wonderful, (1064)
"Location was great!"
United States
richard Alexander
The price is NT$2,202
NT$2,422 total
Jan 4 - 2026/1/5
JR WEST GROUP VIA INN SHINJUKU

Onsen Ryokan Yuen Shinjuku

Onsen Ryokan Yuen Shinjuku
3.5 star property
Shinjuku
9.2 out of 10, Wonderful, (1000)
"Great hotel in Shinjuku, amazing onsen with a view over the city and super helpful Staff!"
United Kingdom
Marta
The price is NT$5,573
NT$6,190 total
Dec 17 - Dec 18
Onsen Ryokan Yuen Shinjuku

Hotel Rose Garden Shinjuku

Hotel Rose Garden Shinjuku
3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1002)
"Great location, nice hotel."
United States
Gregory
The price is NT$2,197
NT$2,659 total
Jan 6 - 2026/1/7
Hotel Rose Garden Shinjuku

Toyoko Inn Tokyo Shinjuku Kabukicho

Toyoko Inn Tokyo Shinjuku Kabukicho
3.0 star property
Shinjuku
8.2 out of 10, Very Good, (1004)
"Clean place to stay"
Canada
George
The price is NT$2,236
NT$2,460 total
Jan 6 - 2026/1/7
Toyoko Inn Tokyo Shinjuku Kabukicho

BESPOKE HOTEL Shinjuku

BESPOKE HOTEL Shinjuku
3.5 star property
Shinjuku
9.0 out of 10, Wonderful, (1002)
"Clean rooms, nice staff, conveniently located. "
United States
Paulina
BESPOKE HOTEL Shinjuku

APA Hotel Shinjuku Kabukicho Chuo

APA Hotel Shinjuku Kabukicho Chuo
3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1002)
"The breakfast was good, the bed was a good size and it had a variety of amenities."
United States
Valerie
The price is NT$2,171
NT$2,626 total
Jan 6 - 2026/1/7
APA Hotel Shinjuku Kabukicho Chuo

E Hotel Higashi Shinjuku

E Hotel Higashi Shinjuku
3.0 star property
Shinjuku
7.8 out of 10, Good, (1001)
"Great place to stay"
Australia
Simon
E Hotel Higashi Shinjuku

MIMARU Tokyo Shinjuku West

MIMARU Tokyo Shinjuku West
3.0 star property
Shinjuku
9.6 out of 10, Exceptional, (502)
"Friendly staff, clean rooms, good location"
Canada
Casey
MIMARU Tokyo Shinjuku West

APA Hotel Shinjuku Gyoemmae

APA Hotel Shinjuku Gyoemmae
3.0 star property
Shinjuku
8.4 out of 10, Very Good, (1955)
"Clean room & helpful staff."
United States
Melissa
The price is NT$2,793
NT$3,379 total
Jan 6 - 2026/1/7
APA Hotel Shinjuku Gyoemmae

Keio Presso Inn Shinjuku

Keio Presso Inn Shinjuku
3.0 star property
Shinjuku
8.6 out of 10, Excellent, (660)
"good hotel to stay in tokyo"
United States
Tomio
The price is NT$3,630
NT$3,993 total
Jan 12 - 2026/1/13
Keio Presso Inn Shinjuku

Premier Hotel Cabin Shinjuku

Premier Hotel Cabin Shinjuku
3.0 star property
Shinjuku
8.6 out of 10, Excellent, (1003)
"Great place for our visit "
United States
Ian
The price is NT$1,919
NT$2,322 total
Jan 6 - 2026/1/7
Premier Hotel Cabin Shinjuku
Save an average of 15% on thousands of hotels when you're signed in

Explore similar 4-star hotels

Many 4-star hotels have the same amenities as 3-star hotels. See all 4-star hotels in Shinjuku.
Still don't see what you're looking for?
See all properties in Shinjuku.
You can also use these popular filters to refine your search.
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Learn more about Shinjuku

This major ward of Tokyo offers a variety of opportunities, from skyline views to trendy restaurants, to its large, peaceful park.

Shinjuku featuring skyline, night scenes and a skyscraper

Top Shinjuku Hotel Reviews

Frequently asked questions

What are the best 3-star hotels in Shinjuku?
For a relaxed and comfy stay around Shinjuku, check out Citadines Central Shinjuku Tokyo. This 3-star hotel is one of the leading properties in the area according to reviews by Expedia guests.
How much does it cost to stay in a 3-star hotel in Shinjuku?
To secure a pocket-friendly 3-star hotel in Shinjuku, make use of Expedia's handy filter tool. Set your budget limit, choose your desired amenities and lots more. You also have the ability to arrange your search results so the cheapest properties appear first.

  • Search for the lowest price per night right now from NT$3,387

What is the difference between a 4-star and 3-star hotel in Shinjuku?
The big difference between a 3- and 4-star hotel in Shinjuku is the quality of service and availability of creature comforts. Three-star hotels are usually more economical and offer the services and amenities you need to ensure your comfort, such as WiFi, breakfast and a gym. You can look forward to a bit more at a 4-star hotel — think upmarket furnishings, deluxe bathroom products and extra touches like day spas.

Explore a world of travel with Expedia