The Best Hotels Closest to Labuan Bajo Port in Labuan Bajo for 2026

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Our top choices for Labuan Bajo Port hotels

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

An aerial view of a small island with clear turquoise waters, a sandy beach, and a few boats.

A hotel room with a bed, a desk, a chair, a table with fruits, and a view of a mountain and water.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

1. AYANA Komodo Waecicu Beach

2.8 km from Labuan Bajo Port

Marvin

NT$5,384

NT$6,515 total

includes taxes & fees

Oct 22 - Oct 23

A waterfront resort with a curved building, outdoor seating, and a view of a distant island.

A resort with a swimming pool, beach, and overwater bungalows.

A wooden deck with seating and a bar area, overlooking a body of water with overwater bungalows in the background.

A modern hotel room with a large window offering a view of a body of water and a distant island. There is a seating area with a sofa and armchairs, and a small table with a decorative item.

2. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2.2 km from Labuan Bajo Port

Iliana

NT$26,128

NT$31,615 total

includes taxes & fees

Nov 1 - Nov 2

A resort with overwater bungalows connected by walkways, surrounded by clear turquoise water and lush green hills.

A wooden deck with a massage chair and a small table with glasses and a bottle, overlooking a calm sea at sunset.

A sunlit infinity pool with lounge chairs and umbrellas, overlooking a body of water and a distant island.

A spacious lobby with a modern design, featuring a large seating area, wooden accents, and large windows offering a view of the sea.

3. Katamaran Hotel & Resort Komodo

2.4 km from Labuan Bajo Port

Salvatore

NT$4,323

NT$5,230 total

includes taxes & fees

Oct 27 - Oct 28

A pool area with lounge chairs and umbrellas, a wooden deck, and a mountain in the background.

A modern bedroom with a large bed, bedside tables, a hanging light fixture, and built-in shelving with storage boxes.

A sunlit dining area with wooden tables and chairs, a ceiling fan, and hanging light fixtures.

A corridor with white walls, blue shutters, and a wooden ceiling.

4. Seaesta Komodo Hotel & Hostel

0.3 km from Labuan Bajo Port

Alexis Catherine

NT$1,796

NT$2,173 total

includes taxes & fees

Oct 27 - Oct 28

A coastal landscape with a small island, clear waters, and distant mountains.

A spacious lobby with wicker furniture, a bar area, and a sign for Meruora Hotel.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

A poolside area with lounge chairs and a view of a harbor with boats.

5. Meruorah Komodo Labuan Bajo

0.3 km from Labuan Bajo Port

Rob

NT$3,369

NT$4,077 total

includes taxes & fees

Nov 1 - Nov 2

A stone pathway surrounded by lush greenery and various tropical plants.

A restaurant with a staircase leading to a garden, outdoor seating, and a tiled floor.

A hotel room with a bed, a desk, a chair, a window with curtains, and a door.

A corridor with wooden chairs and tables, bamboo partitions, and large windows with views of greenery.

6. Centro Bajo Hotel

1.7 km from Labuan Bajo Port

Carrington

NT$415

NT$503 total

includes taxes & fees

Oct 14 - Oct 15

A swimming pool with a lighthouse and boats in the background.

A hotel room with a bed, a desk, a TV, a chair, and a window with a view of a building.

A modern hotel room with a large bed, two wooden chairs, a TV, and a painting on the wall.

A reception desk with a sign reading "RECEPTION" and a wall with the text "HAOUR KOMODO HOTEL".

7. Harbour Komodo Hotel

0.3 km from Labuan Bajo Port

Ryan

NT$1,289

NT$1,560 total

includes taxes & fees

Oct 10 - Oct 11

A coastal landscape with clear turquoise waters, a sandy beach, and boats in the distance.

A bedroom with a large bed, wooden headboard, and a ceiling fan. There are two bedside tables with lamps and a wooden wardrobe.

A wooden deck with a thatched roof, a small outdoor seating area, and a pathway leading to a door.

A swimming pool with lounge chairs and umbrellas, surrounded by greenery and a small building.

8. World BnB

2.3 km from Labuan Bajo Port

Anne

NT$659

NT$798 total

includes taxes & fees

Nov 1 - Nov 2

An outdoor dining area with wooden tables and chairs, overlooking a scenic view of the sea and hills.

A bakery with a display counter, shelves with baked goods, and a wall with inspirational quotes.

A modern hotel room with a large bed, a TV, a sofa, and a view of the city.

A poolside area with wooden deck, seating, and a view of the ocean.

9. ZASGO HOTEL

0.9 km from Labuan Bajo Port

Jonas

NT$1,670

NT$2,021 total

includes taxes & fees

Oct 8 - Oct 9

A bedroom with a large bed, a desk, and a view of the outdoors.

A bedroom with a large bed, wooden headboard, a nightstand, a dresser, a TV, and a view of the outdoors.

A room with a wooden bench, a refrigerator, a painting on the wall, and a coffee maker.

A modern kitchen with a wooden countertop, a built-in sink, and a flat-screen TV mounted on the wall.

10. Komodo Suites Downtown

0.3 km from Labuan Bajo Port

Eliel

NT$1,530

NT$1,852 total

includes taxes & fees

Oct 9 - Oct 10

A poolside area with lounge chairs and a view of the sea and boats.

A modern bedroom with a wooden bed, a desk, and a chair.

A modern hotel room with a large bed, a wooden headboard, a seating area with a table and chairs, and a bathroom with a mirror and sink.

A wooden bench with cushions, a hanging light fixture, and a view of a coastal town.

11. OhJulia Hotel Komodo

0.2 km from Labuan Bajo Port

Kizzy

NT$2,108

NT$2,551 total

includes taxes & fees

Nov 6 - Nov 7

A modern hotel with a pool area, lounge chairs, and umbrellas.

A modern outdoor dining area with a bar and seating arrangements.

A modern interior with a bar area, seating, and a view of a lush garden.

A coastal landscape with a clear beach, boats, and mountainous terrain.

12. Crowne Plaza Labuan Bajo by IHG

1.5 km from Labuan Bajo Port

nicole

NT$4,300

NT$5,203 total

includes taxes & fees

Nov 5 - Nov 6

A balcony with a view of a marina, boats, and a pier.

A modern lobby with seating, a reception desk, and a wall-mounted sign.

A modern bathroom with a white sink, mirror, and toilet.

A modern kitchen with a built-in bar area, featuring a granite countertop, dark cabinetry, and a decorative wooden wall panel.

13. Flamingo Ceria

0.2 km from Labuan Bajo Port

Stephanie

NT$1,187

NT$1,436 total

includes taxes & fees

Oct 12 - Oct 13

A garden pathway leading to a rustic wooden structure with a thatched roof.

A bedroom with a bed, a wooden door, a window with curtains, and a small table with a plant.

A bathroom with a toilet, sink, and shower.

A spacious room with a high ceiling, large windows, and a table with chairs.

14. Palulu Garden Homestay

0.3 km from Labuan Bajo Port

Carrington

NT$395

NT$483 total

includes taxes & fees

Oct 14 - Oct 15

A two-story building with balconies, large windows, and a flat roof.

A bathroom with a sink, mirror, shower, and a blue door.

A bedroom with a wooden bed, a desk, and a view of a garden.

A hotel room with two beds, a desk, and a view of the outdoors.

15. Hotel Bonne Nuit

1 km from Labuan Bajo Port

Tereza

NT$514

NT$686 total

includes taxes & fees

Oct 23 - Oct 24

A pool area with multiple water features, surrounded by tropical vegetation and a view of the sea.

A beachfront hotel with a red-roofed building, palm trees, and a view of the sea.

A modern hotel room with a large bed, a desk, and a view of the ocean.

An outdoor dining area with tables and chairs, surrounded by a wooden deck and a rope barrier.

16. Bintang Flores Hotel

1.8 km from Labuan Bajo Port

Heidi

NT$2,190

NT$2,650 total

includes taxes & fees

Nov 6 - Nov 7

A building with a balcony covered in hanging vines, a staircase, and a view of a body of water.

A coastal marina with boats, a lighthouse, and a pier.

A hotel room with a large bed, a desk with a chair, a small round table, a wooden bench, a window with curtains, and a door.

A wooden dining table with benches, a red cushioned chair, a mirror, and two bottles of water.

17. Komodo Lodge

0.4 km from Labuan Bajo Port

Mark

NT$1,099

NT$1,330 total

includes taxes & fees

Oct 9 - Oct 10

A stone archway entrance to a building with a dining area visible inside.

A person sitting at a desk with a red VAIO laptop and a brochure.

A courtyard with a central fountain, surrounded by tropical plants and a building with a tiled roof.

A dining area with tables covered in white tablecloths, wooden chairs, and a tiled floor.

18. Komodo Boutique Hotel

2.8 km from Labuan Bajo Port

Ka Yee Starme

NT$586

NT$709 total

includes taxes & fees

Nov 5 - Nov 6

A poolside view with thatched-roof structures and palm trees at sunset.

A spacious indoor dining area with wooden ceiling and large windows, featuring tables and wicker chairs.

A hotel with a pool, a pier, and boats on the water.

An aerial view of a resort with a swimming pool, palm trees, and red-roofed buildings.

19. LAPRIMA Hotel Flores

1.3 km from Labuan Bajo Port

Reny

NT$1,758

NT$2,128 total

includes taxes & fees

Oct 9 - Oct 10

A circular pool with a tree in the center, surrounded by lush greenery.

A bedroom with a large bed, a TV mounted on the wall, a wooden ceiling, and a view of greenery outside.

A row of bungalow-style cottages with pitched roofs, surrounded by a landscaped garden with pathways and small trees.

A wooden cabin with a pitched roof, a front porch with seating, and a gravel pathway.

20. Tahoma Villas Labuan Bajo by ABM

2.9 km from Labuan Bajo Port

Mayra

NT$1,668

NT$2,019 total

includes taxes & fees

Oct 24 - Oct 25

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Compare popular hotels close to Labuan Bajo Port

Property	Property class	Guest rating
AYANA Komodo Waecicu Beach	9.6 Exceptional 129 reviews	View
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo	10.0 Exceptional 34 reviews	View
Katamaran Hotel & Resort Komodo	9.4 Exceptional 106 reviews	View
Seaesta Komodo Hotel & Hostel	9.2 Wonderful 114 reviews	View
Meruorah Komodo Labuan Bajo	9.0 Wonderful 230 reviews	View

Top Labuan Bajo Port Hotel Reviews

Meruorah Komodo Labuan Bajo

10/10 Excellent

"My second stay at the Meruorah, and just as good as the first. I had a sea view room this time, it’s well worth the upgrade, the view is beautiful although the boats can get a little noisy. The rooms are spacious and nicely furnished, the staff are very friendly and the included buffet breakfast caters for everyone, so much to choose from. I would definitely recommend staying here, I hope I will return again some day."

ZASGO HOTEL

10/10 Excellent

"Brilliant hotel, lovely pool with swim up bar. Gorgeous views"

Harbour Komodo Hotel

10/10 Excellent

"Basic room with everything needed. Clean and up to date. Friendly staff."

Seaesta Komodo Hotel & Hostel

10/10 Excellent

"Bar was very chilled, great vibes"

Pavilla Labuan Bajo

10/10 Excellent

"Lovely place, lovely staff, a bit up the hill from town but an easy 8m Grab bike to the heart of everything!"

Flamingo Avia Labuan Bajo

8/10 Good

"My review would have been a 5 star except the room for my daughter on the first floor was horribly moldy. There were no other rooms so she moved to my room on the second floor. If you can be guaranteed a room on second floor or above, I would stay here. The breakfast area was on the top floor with a beautiful view of the harbor. Staff was very helpful and let us leave our bags there while we went on a tour."

La Colina Komodo Hotel

8/10 Good

"Nice view. The rooms are very simple and comfortable for a short stay but not more. Helpful staff to get your luggage up the hill and stairs."

Crowne Plaza Labuan Bajo by IHG

10/10 Excellent

"Great"

OhJulia Hotel Komodo

10/10 Excellent

"I stayed here with my son last week. The hotel is in a perfect location, right in town close to great places for dinner and tour bookings. The hotel is very clean and neat with an incredible view of the harbour from the pool area. The hotel staff are SO lovely and helpful. We had to order breakfast online each day and indicate the time. They do make up breakfast boxes if you have an early tour, we had a small mishap with this so double check your order at reception the night before. Room was terrific, on the smaller side but nice and clean with small balcony. WhatsApp is a good way to communicate with reception as there isn’t a phone in the room. Great air conditioning. A number of steps up the front of the hotel, but porter always on hand to help with bags. Overall we loved the place and if we returned we’d stay here again. Try the Italian restaurant next door👌Our photos won’t upload, but the place has a light and airy feel with natural tones and Italian vibes."

Other attractions near Labuan Bajo Port

Waecicu Beach

8.2/10 (19 reviews)

Why not spend a carefree afternoon at Waecicu Beach during your travels in Labuan Bajo? Wander the gardens or discover the area's sunsets.

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Plaza Marina Labuan Bajo

You can do some window-shopping at Plaza Marina Labuan Bajo during your visit to Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Pede Labuan Beach

8.2/10 (19 reviews)

If a restful vacation is part of your travel plans, Pede Labuan Beach might be the perfect place to seek out during your trip to Labuan Bajo. Wander the gardens or discover the area's sunsets.

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Batu Cermin Cave

8.6/10 (23 reviews)

Explore the great outdoors at Batu Cermin Cave, a lovely green space in Labuan Bajo. Wander the beaches and gardens in the area.

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Sylvia Hill

8.8/10 (3 reviews)

Commune with nature and explore the great outdoors at Sylvia Hill during your travels in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Frequently asked questions

What's the area like around Labuan Bajo Port?

Labuan Bajo Port is located in an area of Labuan Bajo that travelers like for its island views, beaches, and sunsets. If you're looking for a convenient place to stay, check out the 101 hotels and other accommodations you'll find within a mile.

What's the best place to stay near Labuan Bajo Port?

Adjacent to Labuan Bajo Port, Meruorah Komodo Labuan Bajo is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and a full-service spa. Other good options within a short distance include Harbour Komodo Hotel and ZASGO HOTEL.

How many hotels will I be able to find near Labuan Bajo Port?

Expedia has 101 hotels and other accommodations within a mile from Labuan Bajo Port.

If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and receive a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to get the best deals available near Labuan Bajo Port.

Where can I learn more about changing or cancelling my trip in the area near Labuan Bajo Port?

For more details about changing or cancelling your stay near Labuan Bajo Port, go to https://www.expedia.com/service/.

What can I see and do near Labuan Bajo Port?

Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. Rangko Cave is also located 7.3 mi (11.7 km) from Labuan Bajo Port, and Cunca Wulang Waterfall is 8.8 mi (14.2 km) away.

Find hotels near Labuan Bajo Port, Labuan Bajo from NT$483

Change your mind

Treat yourself

Be picky

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Labuan Bajo Port hotels

1. AYANA Komodo Waecicu Beach

2. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

3. Katamaran Hotel & Resort Komodo

4. Seaesta Komodo Hotel & Hostel

5. Meruorah Komodo Labuan Bajo

6. Centro Bajo Hotel

7. Harbour Komodo Hotel

8. World BnB

9. ZASGO HOTEL

10. Komodo Suites Downtown

11. OhJulia Hotel Komodo

12. Crowne Plaza Labuan Bajo by IHG

13. Flamingo Ceria

14. Palulu Garden Homestay

15. Hotel Bonne Nuit

16. Bintang Flores Hotel

17. Komodo Lodge

18. Komodo Boutique Hotel

19. LAPRIMA Hotel Flores

20. Tahoma Villas Labuan Bajo by ABM

Compare popular hotels close to Labuan Bajo Port

Top Labuan Bajo Port Hotel Reviews

Meruorah Komodo Labuan Bajo

ZASGO HOTEL

Harbour Komodo Hotel

Seaesta Komodo Hotel & Hostel

Pavilla Labuan Bajo

Flamingo Avia Labuan Bajo

La Colina Komodo Hotel

Crowne Plaza Labuan Bajo by IHG

OhJulia Hotel Komodo

Other attractions near Labuan Bajo Port

Waecicu Beach

Plaza Marina Labuan Bajo

Pede Labuan Beach

Batu Cermin Cave

Sylvia Hill

Frequently asked questions

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