Find Boutique Hotels in Santorini

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Recommended hotels in Santorini

Hill Suites

Hill Suites
Santorini
9.8 out of 10, Exceptional, (313)
"Excellent room with a hot tub, well decorated with a huge bathroom. Room was comfortable and the hotel location is fairly centrally located. The manager, Tomas, is probably one of the best and most responsive hosts I have ever seen."
United States
Manish
Hill Suites

Ducato di Oia - Adults Only

Ducato di Oia - Adults Only
4.0 star property
Santorini
9.4 out of 10, Exceptional, (331)
"We enjoyed the stay. Thank you."
United States
Kazuiku
The price is NT$5,995
NT$6,920 total
includes taxes & fees
Jan 6 - 2026/1/7
Ducato di Oia - Adults Only

Just Blue

Just Blue
Santorini
9.4 out of 10, Exceptional, (296)
"Yes, everything was great. Ardi, took great care of us "
United States
Nelson
Just Blue

Nano Oia Villas

Nano Oia Villas
Santorini
9.8 out of 10, Exceptional, (51)
"Our location had a beautiful view. It was centrally located to everything. "
United States
Cristo
The price is NT$5,748
NT$6,546 total
includes taxes & fees
Dec 30 - Dec 31
Nano Oia Villas

Hotel Omiros

Hotel Omiros
4.0 star property
Santorini
8.2 out of 10, Very Good, (10)
"Good service Receptionist service was best Rooms are clean "
Canada
Dhanwinderjit S
Hotel Omiros

You And Me Suites

You And Me Suites
Santorini
9.6 out of 10, Exceptional, (81)
"I love this place. "
United States
gilza
The price is NT$6,370
NT$7,253 total
includes taxes & fees
Jan 4 - 2026/1/5
You And Me Suites

Merovigliosso Apartments

Merovigliosso Apartments
Santorini
9.6 out of 10, Exceptional, (188)
"Very Clean, kind and respectful staff, and good breakfast."
Canada
Zahra
The price is NT$3,757
NT$4,285 total
includes taxes & fees
Jan 20 - 2026/1/21
Merovigliosso Apartments

Cleo's Dream Villa

Cleo's Dream Villa
Santorini
10.0 out of 10, Exceptional, (61)
"Absolutely dreamy location with stunning views! Annamaria was exceptional with communication and managing the property! Absolute stunning location and apartment."
Canada
Robert
The price is NT$3,522
NT$4,019 total
includes taxes & fees
Jan 21 - 2026/1/22
Cleo's Dream Villa

Phaos Santorini Suites

Phaos Santorini Suites
Santorini
9.2 out of 10, Wonderful, (217)
"Beautiful stay"
United States
Maria
The price is NT$1,595
NT$1,830 total
includes taxes & fees
Jan 10 - 2026/1/11
Phaos Santorini Suites

Above Blue Suites

Above Blue Suites
Santorini
9.6 out of 10, Exceptional, (308)
"Beautiful location, nice spacious room."
Canada
Victor
The price is NT$3,241
NT$3,699 total
includes taxes & fees
Dec 31 - 2026/1/1
Above Blue Suites
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Santorini Hotel Reviews

Frequently asked questions

Searching for a cozy accommodation when you visit Santorini?
A boutique hotel may be just what you're looking for if you enjoy smaller hotels with personalized service and good atmosphere. Choose from 17 boutique-style accommodations in Santorini to find a property that characterizes the uniqueness of this destination.
What's the best boutique-style hotel in Santorini?
Iconic Santorini by Sandglass is a favorite hotel with our travelers looking for a stylish accommodation, and features 19 guestrooms, a full-service spa, and free breakfast. Grace Hotel, Auberge Collection and Santo Pure Oia Suites & Villas are two other options for a boutique stay.
How many boutique hotels should I expect to find in Santorini?
Expedia has 17 boutique hotels in Santorini.
What's there to see and do in Santorini?
Visitors speak positively about this destination's breathtaking beach views, incredible sunsets, and beautiful island views. Attractions and activities to experience around Santorini include Santo Wines, Prophet Elias Monastery, and Athinios Port. While you're here, you might also like to explore more of the area and take in additional sights like Kamari Beach, Ancient Thira, and Museum of Prehistoric Thira.
What kind of weather should I plan for when I travel to Santorini?
Understanding the weather in Santorini will help you enjoy your stay to the fullest. The hottest months are usually August and July with an average temp of 76°F, while the coldest months are January and February with an average of 58°F. Average annual precipitation for Santorini is 13 inches.
What's the best way to get to my boutique hotel in Santorini?
You have a few options for traveling to and around Santorini. The closest major airport is Santorini National Airport (JTR), which is located 0.9 mi (1.5 km) from the heart of the city. If you'd like to venture out around the area, you may want to rent a car for your trip.

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