A lighthouse on a rocky coastline with the ocean in the foreground.

San Juan Islands 3 Stars Hotels

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on San Juan Islands 3 Star Hotels

Tonight
Sep 16 - Sep 17
Tomorrow
Sep 17 - Sep 18
This weekend
Sep 18 - Sep 20
Next weekend
Sep 25 - Sep 27

Our top choices for San Juan Islands 3-star hotels

A wooden pier leading to a building with large windows and a flagpole.
A wooden boardwalk leading to a building with multiple windows and lights.
A wooden interior with a bench, tables, and a staircase leading to the hotel office.
A wooden pier leading to a dock with boats, a grocer's shop, and a forested hillside in the background.

1. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Diane
NT$5,693
NT$6,283 total
includes taxes & fees
Oct 1 - Oct 2
Lopez Islander Resort
A living room with a sofa, armchairs, a coffee table, and a fireplace.
A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.
A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.
A building with a sign that reads "OFFICE Gift Shop" at the entrance.

2. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
NT$7,315
NT$8,095 total
includes taxes & fees
Oct 1 - Oct 2
Earthbox Inn & Spa
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.
A hotel with a large building, a pond in front, and trees around.
A serene lakeside setting with string lights, wicker chairs, and a fire pit area.
A restaurant with tables set for dining, large windows offering a view of boats and greenery.

3. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
NT$6,813
NT$7,894 total
includes taxes & fees
Oct 12 - Oct 13
Roche Harbor Resort
Two people relaxing by a fire pit with a view of a harbor and a large ship.
A bar area with a large TV screen displaying a landscape, a bookshelf with books and bottles, and leather chairs.
A couple in white bathrobes sitting on a bed with a textured headboard, two wall-mounted lamps, and a decorative wall piece.
A coastal town at dusk with a marina, boats, and a large cruise ship docked.

4. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Robert
NT$12,567
NT$13,905 total
includes taxes & fees
Oct 6 - Oct 7
Friday Harbor House
A waterfront property with multiple buildings, including a large house with a prominent roof and a smaller structure with a chimney.
A child walking on a gravel path towards a rustic wooden cabin surrounded by lush greenery and flowering plants.
A hotel room with a bed, a TV mounted on the wall, a desk with a chair, and a large window offering a view of the sea and mountains.
A view from a porch with a white railing, overlooking a body of water, mountains, and a grassy area with trees and a fence.

5. Outlook Inn

Outlook Inn
Eastsound
United States
Amado
NT$10,226
NT$11,762 total
includes taxes & fees
Sep 28 - Sep 29
Outlook Inn
An aerial view of a coastal marina with boats docked, surrounded by lush greenery and residential areas.
A wooden porch with two cushioned chairs, a hanging flower pot, and a sign thanking the carpenter family.
A cozy cabin interior with a kitchen, dining area, and a fireplace.
A cozy room with a fireplace, a television, a dining area, and a sofa with a view of greenery.

6. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Nemo
NT$6,450
NT$7,118 total
includes taxes & fees
Oct 16 - Oct 17
Deer Harbor Inn
A wooden deck with a view of a lake and mountains.
A multi-story building with a sign reading "LANDMARK CONDOMINIUM LODGING".
A living room with a sofa, a coffee table, a dining table, and a chandelier.
A cozy living room with a dining table, chairs, a patterned armchair, and a wooden coffee table.

7. Landmark Inn on Orcas Island

Landmark Inn on Orcas Island
Eastsound
United States
Deborah
Landmark Inn on Orcas Island
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.
A two-story building with a red door, surrounded by a garden with various plants and flowers.
A spacious entryway with a wooden staircase, a patterned rug, and potted plants.
A grassy area with a pond, trees, and a red chair.

8. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
James
NT$7,314
NT$8,071 total
includes taxes & fees
Oct 1 - Oct 2
Trumpeter Inn
A wooden deck with a table and grill, overlooking a lake with a distant bridge.
A wooden cabin with a dining area and a patio overlooking a rocky shoreline.
A wooden deck with two green umbrellas, a wooden pier extending into calm water, and a view of distant land.
A wooden cabin interior with a dining table, chairs, a sofa, and a ceiling fan.

9. West Beach Resort

West Beach Resort
Eastsound
United States
lorrie
NT$6,711
NT$7,406 total
includes taxes & fees
Oct 14 - Oct 15
West Beach Resort
A wooden pier extending over calm water with a clear sky above.
A spacious dining area with wooden tables and chairs, large windows offering views of the outdoors, and a fireplace.
A wooden deck with a glass door leading to a bedroom, a glass table, and a view of a lake with boats.
A neatly arranged bedroom with a large bed, bedside tables, a bedside lamp, a window with curtains, and a small table with cups.

10. Kingfish at West Sound

Kingfish at West Sound
Eastsound
United States
Yoav
Kingfish at West Sound
A wooden deck with a railing, potted plants, and hanging flower baskets.
A house with a red exterior, a front porch, and a staircase leading to the entrance.
A cozy room with a wooden bench, a chair, a small table with a lamp, and a stained glass window with a plant on the windowsill.
A cozy living room with a fireplace, a red velvet chair, and a stone wall.

11. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
Eastsound
United States
Kaitlyn
NT$7,982
NT$8,808 total
includes taxes & fees
Sep 28 - Sep 29
Kangaroo House B&B on Orcas Island
A two-story building with a covered porch, surrounded by a variety of flowering plants.
A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.
A man seated at a piano with sheet music, surrounded by books and a vase of flowers.
A dining room with a large wooden table surrounded by chairs, a patterned rug, and a cabinet with a mirror.

12. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
NT$12,535
NT$13,870 total
includes taxes & fees
Sep 22 - Sep 23
Friday Harbor Grand B&B
A rustic wooden sign with the text "Inn To The Woods" and a moon and stars design.
A wooden sign with "IN" written on it, a potted plant, and a pathway leading to a building.
A four-poster canopy bed with a brown bedspread, multiple decorative pillows, and a floral-patterned bench at the foot of the bed.
A wooden deck with wicker furniture, a table with a glass top, and potted plants.

13. Inn to the Woods B&B

Inn to the Woods B&B
Friday Harbor
United States
Betsy
Inn to the Woods B&B
A bedroom with a large bed, a wooden wardrobe, a fluffy rug, and a hallway leading to a door.
A modern kitchen with wooden cabinets, a central island, and a red chair.
A kitchen with wooden cabinets, a white countertop, a built-in oven, a microwave, and a stainless steel sink.
A stone pathway leading to a wooden deck with a metal chair and a potted plant.

14. Walk Everywhere! Friday Harbor Home w/ Patio

Walk Everywhere! Friday Harbor Home w/ Patio
Friday Harbor
Walk Everywhere! Friday Harbor Home w/ Patio
A house with a gravel driveway, a wooden deck, and a front porch.
A house with a front porch, a flag, and a bench.
A modern living space with a sofa, dining table, and kitchen area.
A bedroom with a large bed, two armchairs, a dresser, and a view of the outdoors.

15. Walkable, Dog Friendly! Friday Harbor Stay w/ Deck

Walkable, Dog Friendly! Friday Harbor Stay w/ Deck
Friday Harbor
Walkable, Dog Friendly! Friday Harbor Stay w/ Deck
A wooden balcony with a view of tall evergreen trees and a body of water.
A spacious living room with a sofa, a coffee table, and a fireplace.
A bedroom with a wooden ceiling, a bed with a patterned bedspread, and built-in wooden drawers along the wall.

16. Lopez Island Hideaway w/ Coastal Views + Deck!

Lopez Island Hideaway w/ Coastal Views + Deck!
Lopez Island
United States
Krijn
Lopez Island Hideaway w/ Coastal Views + Deck!
A covered outdoor area with a wooden ceiling, large windows, and a dining table with chairs.
A large wooden cabin with multiple windows and a porch, surrounded by dense forest.
A bedroom with a large bed, a chair, a nightstand, and a view through a glass door.
A spacious living room with large windows, a red patterned rug, and a leather sofa.

17. Private Beach & Hot Tub: Eastsound Waterfront Gem

Private Beach & Hot Tub: Eastsound Waterfront Gem
Eastsound
Private Beach & Hot Tub: Eastsound Waterfront Gem
A large two-story house with a stone fire pit and Adirondack chairs in the front yard.
A dining room with a large wooden table, six chairs, and hanging light fixtures.
A two-story house with a front porch, surrounded by a well-maintained lawn and tall trees.
A spacious living room with a large sectional sofa, a fireplace, and a view of the outdoors through large windows.

18. Hot Tub & Pond View! Private Friday Harbor Retreat

Hot Tub & Pond View! Private Friday Harbor Retreat
Friday Harbor
Hot Tub & Pond View! Private Friday Harbor Retreat
A garden patio with a table and chairs, surrounded by lush greenery and a wooden fence.
A bedroom with a bed, curtains, framed pictures, a nightstand, and a dresser.
A bathroom with a sink, mirror, vanity, and plants.
A residential house with a front porch, a driveway, and a well-maintained lawn.

19. The Kirkhouse Bed and Breakfast

The Kirkhouse Bed and Breakfast
Friday Harbor
The Kirkhouse Bed and Breakfast

20. NEW Listing! Charming Cabin W/hot Tub, Near Everything in Deer Harbor - Dogs OK!

NEW Listing! Charming Cabin W/hot Tub, Near Everything in Deer Harbor - Dogs OK!
Deer Harbor
NEW Listing! Charming Cabin W/hot Tub, Near Everything in Deer Harbor - Dogs OK!
Save an average of 15% on thousands of hotels when you're signed in

Explore similar 4-star hotels

Many 4-star hotels have the same amenities as 3-star hotels. See all 4-star hotels in San Juan Islands.
Tucker House Inn

Tucker House Inn

275 C Street Friday Harbor WA
NT$4,764
NT$5,272 total
Oct 12 - Oct 13
includes taxes & fees
9.2/10 Wonderful! (300 reviews)
Tucker House Inn
Otters Pond Bed & Breakfast

Otters Pond Bed & Breakfast

100 Tomihi Dr Eastsound WA
Get rates
10/10 Exceptional! (72 reviews)
Otters Pond Bed & Breakfast
Still don't see what you're looking for?
See all properties in San Juan Islands.
You can also use these popular filters to refine your search.
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Learn more about San Juan Islands

Kayaking between forested islands reveals hidden coves and curious seals, while orcas breach offshore during whale-watching tours. Hike Mount Constitution on Orcas Island for sweeping views, then explore Friday Harbor's galleries and savor fresh-caught seafood at waterfront restaurants.

See all hotels in San Juan Islands
A lighthouse on a rocky coastline with the ocean in the foreground.

Top San Juan Islands Hotel Reviews

Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"We loved the property, the rooms, the restaurant and the staff. We had a marvelous time and we look forward to coming back. Also we rented a car above Roche Harbor and that was super convenient. A truly 5 star experience."
CATHY 1-night trip
Posted 3 hours ago
Roche Harbor Resort
Landmark Inn on Orcas Island

Landmark Inn on Orcas Island

8/10 Good
"The view of the water front was so pretty! B"
Gabby 2-night trip
Posted 2 days ago
Landmark Inn on Orcas Island
Deer Harbor Inn

Deer Harbor Inn

8/10 Good
"It’s very basic considering the cost. The bed is very soft and not particularly comfortable with 2 people of different weights. Everything just felt a bit thrown together, which is ok but at this price point we had higher expectations."
Clare 1-night trip
Posted 7 days ago
Deer Harbor Inn
Trumpeter Inn

Trumpeter Inn

10/10 Excellent
"A magical stay with amazing breakfast each day and cute farm animals to visit. Loved everything about it 💗"
James 3-night trip
Posted 11 days ago
Trumpeter Inn

Frequently asked questions

How much does it cost to stay in a 3-star hotel in San Juan Islands?
Discover the ideal combination of comfort, affordability and quality at a 3-star hotel in San Juan Islands with Expedia's filter tools. Enter your dates of travel and then personalize your search based on the rate you wish to pay per night.
  • Search for the lowest price per night right now from NT$5,272
What is the difference between a 4-star and 3-star hotel in San Juan Islands?
Book a room at a 3-star hotel and you can look forward to comfortable and tidy rooms and conveniences such as complimentary WiFi, gym equipment and tea and coffee making facilities. These lodgings may also feature an on-site restaurant and bar. Elevate your San Juan Islands break by reserving a 4-star hotel. With things like a spa, 24/7 room service and deluxe toiletries, you'll enjoy a heightened level of comfort.
What is the difference between a 3-star hotel and a motel in San Juan Islands?
Motels typically offer more economical rates compared to hotels, which makes them great if you're road-tripping around San Juan Islands on a set budget. A great option for overnight stays, these roadside getaways come with simply furnished rooms, limited services and on-site parking. Choose a 3-star hotel and you can expect to pay more for additional comfort, space and amenities. Travelers can take advantage of things like free WiFi, gyms and business facilities at this style of property.

Explore a world of travel with Expedia