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Top Pet-friendly San Juan Islands Hotels

Earthbox Inn & Spa

410 Spring Street Friday Harbor WA

13 min drive from Roche Harbor Marina

Enjoy hiking or biking trails near this city-center hotel, where dogs are treated to pet-friendly amenities, like a dog park. Fees apply for pets.

8.8/10 Excellent! (1,008 reviews)

"Convenient location and the kids loved the indoor pool."

Reviewed on 2026/7/8

Tucker House Inn

275 C Street Friday Harbor WA

13 min drive from Roche Harbor Marina

Four-legged friends will appreciate the amenities, such as food and water bowls, during their stay (fees apply) at this pet-friendly bed & breakfast.

9.2/10 Wonderful! (291 reviews)

"Booked through hotel.com. Very disappointed with room. Make sure you know what room you are getting when you book!"

Reviewed on 2026/5/21

Deer Harbor Inn

33 Inn Lane Deer Harbor WA

28 min walk from Roche Harbor Marina

Stay at this hotel in Deer Harbor. Enjoy free WiFi, free parking, and a garden. Popular attractions Skull Island State Park and West Sound Marina are located ...

8.4/10 Very Good! (211 reviews)

"I cannot recommend this hotel. It feels quite empty, no host, no place to eat breakfast nearby no advice to get to a place to eat. We had trouble using the code to get in our room. Phones do not work there unless you are on their wifi. Wifi isn't available unless you are in the room to find the wifi ..."

Reviewed on 2026/7/11

See all 579 properties in San Juan Islands

Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.