San Juan Island Vacations

Book a Hotel + Flight or Car together to unlock savings

  • Plan, book, travel with confidence

  • Better together

    Save up to NT$5,067 when you book a flight and hotel together*

  • Find the right fit

    With over 300,000 hotels worldwide, it's easy to create a perfect package

  • Rest easy

    Plan, book, and manage your trip all in one place

Find the Best San Juan Island Vacation Packages

San Juan Island Hotel Deals

Inn to the Woods B&B

Inn to the Woods B&B

3.5 out of 5
46 Elena Drive Friday Harbor WA
9.8/10 Exceptional! (89 reviews)
EVERYTHING about the Inn to the Woods was OUTSTANDING!!!!

Reviewed on 2026/1/12

Get rates
Inn to the Woods B&B
Snug Harbor Resort

Snug Harbor Resort

2.5 out of 5
1997 Mitchell Bay Rd Friday Harbor WA
The price is NT$6,460 per night from Feb 25 to Feb 26
NT$6,460
NT$7,129 total
Feb 25 - Feb 26
includes taxes & fees
9.8/10 Exceptional! (456 reviews)
Very clean, spacious and has everything you need to spend 2 or 3 days disconnecting from day to day life and connecting with nature. I’d love to come back again soon! Staff were very informative and friendly.

Reviewed on 2026/2/1

Snug Harbor Resort
Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street Friday Harbor WA
Fully refundableReserve now, pay when you stay
The price is NT$5,658 per night from Feb 20 to Feb 21
NT$5,658
NT$6,261 total
Feb 20 - Feb 21
includes taxes & fees
8.4/10 Very Good! (1,004 reviews)
excellent staff

Reviewed on 2026/2/16

Friday Harbor Suites
See all 819 properties in San Juan Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Discover the most popular places to visit in San Juan Island

Roche Harbor Drone

Roche Harbor Marina

4.5/5(32 reviews)

Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.

Roche Harbor Marina
Lime Kiln Point State Park showing a house and forests

Lime Kiln Point State Park

5/5(16 reviews)

Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.

Lime Kiln Point State Park
San Juan County Park which includes a lake or waterhole as well as a small group of people

San Juan County Park

4/5(4 reviews)

A hotspot for kayakers, this scenic and diverse campsite is the perfect retreat for both those wanting to relax and adventurists.

San Juan County Park

Frequently asked questions

Can I cancel my flight booking to San Juan Island due to COVID-19?
If you haven't booked yet, scan the terms and conditions of the airfare you're considering. If you've already locked in your flight to San Juan Island, click through to our Customer Service Portal. The information here will help determine which COVID-19 policies are applicable to your reservation and guide you with the next steps.
What's the best way to find cheap flights to San Juan Island that have flexible change policies?
At Expedia, we've been channeling our inner yoga master to provide you with the most flexible airfares in town. Simply click on "No change fee" directly beneath the "Flexible change policies" subheading to find your perfect flight to San Juan Island.
What are some of the general tips for travelers to San Juan Island during the COVID-19 outbreak?
With the continuation of the COVID-19 outbreak, traveling now comes with a few extra challenges. Make a note of these valuable tips before jumping on your plane to San Juan Island:
  • Before you book a flight, find out if any travel restrictions apply — in both your destination and origin. Get up-to-date information by reviewing government websites.
  • Wear a face mask during airport screening. A TSA employee will require you to lower your mask temporarily for identification purposes.
  • Instead of handing a TSA officer your boarding pass, place it directly on the reader yourself. When that's done, hold it up for inspection.
  • You can take one container of hand sanitizer up to 12 oz (350 ml) in your carry-on baggage. You'll need to remove it for screening.
  • Put any personal items (e.g, keys, phone and coins) in your carry-on instead of a bin to minimize handling during the screening process.
  • Separate any food you're carrying for X-ray scanning. Food items often set off the alarm. Placing them in a clear plastic bag and into a bin reduces the need for a TSA officer to handle and inspect your belongings.

Which airlines fly to San Juan Island?
Let Alaska Airlines get you there. This popular carrier operates 9722 flights a month to Seattle - Tacoma Intl. Airport (SEA), a San Juan Island gateway.
How can I find cheap tickets to San Juan Island?
A helpful strategy for scoring cheap fares is to be flexible with your travel dates. Begin with searching for your flight to San Juan Island, then click on the "flexible dates" link for a list of prices for nearby days. Another good tip? Book in advance. For an idea of fares, was the best price for a flight to San Juan Island in the last seven days.
How much is a flight to San Juan Island?
You could have scored a return air ticket to San Juan Island from anywhere between and in the last seven days. For one-way trips leaving from (), the lowest amount paid during this period was just .
What are the most popular airports to fly into in San Juan Island?
Pack your suitcase and fly into Seattle - Tacoma Intl. Airport (SEA), San Juan Island's main flight hub. Book a fare on one of the 17599 flights that touch down here every month.
When is the cheapest time to fly to San Juan Island?
If you'd prefer to spend your money exploring San Juan Island rather than on getting there, jet off early in the week. The cheapest day to fly is generally Tuesday, with Monday close behind. With many folks keeping their travel to weekends, Saturday often has the costliest airfares.
How much is a plane ticket to San Juan Island?
In the last seven days, plane fares to San Juan Island cost between and . The early bird catches the worm, so land yourself a great deal today.
Which airlines with flights to San Juan Island employ COVID-19 cleanliness policies?
As people begin traveling once again, the majority of airlines have introduced physical distancing and other preventive measures to reduce the spread of COVID-19. Here are just some of them:
  • Alaska Airlines - this airline is known for providing passenger masks and cleaning with disinfectant.
  • Delta - this airline is known for electrostatic cleaning and cleaning with disinfectant.
  • Southwest Airlines - this airline is known for providing passenger masks and cleaning with disinfectant.

Explore a world of travel with Expedia

* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.