An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,435 reviews)
"Great stay"
United States
Loretta
The price is NT$6,054
NT$7,880 total
includes taxes & fees
Aug 30 - Aug 31
The Dana on Mission Bay

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,562 reviews)
"Gorgeous resort!"
United States
Maria
The price is NT$6,695
NT$9,390 total
includes taxes & fees
Sep 7 - Sep 8
San Diego Mission Bay Resort

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,825 reviews)
"Great property and location."
United States
Jared
The price is NT$7,149
NT$9,913 total
includes taxes & fees
Aug 30 - Aug 31
Paradise Point Resort & Spa

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very Good, (1,659 reviews)
"We absolutely loved this hotel and will definitely revisit!"
United States
Casey
The price is NT$6,695
NT$9,391 total
includes taxes & fees
Sep 1 - Sep 2
Hyatt Regency Mission Bay Spa and Marina

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,223 reviews)
"Great hotel , awesome breakfasts, very nice and spacious rooms , overall would definitely recommend!!!"
United States
Magdalena
The price is NT$4,702
NT$5,405 total
includes taxes & fees
Aug 23 - Aug 24
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

6. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,506 reviews)
"Loved the stay the staff were amazing!"
United States
Cari
The price is NT$3,587
NT$4,123 total
includes taxes & fees
Sep 13 - Sep 14
Hilton Garden Inn San Diego Old Town/SeaWorld Area

7. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,701 reviews)
"Very nice hotel, close to the SD Airport."
Mexico
Brenda
The price is NT$5,110
NT$5,874 total
includes taxes & fees
Aug 30 - Aug 31
Hampton Inn & Suites San Diego Airport Liberty Station

8. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,691 reviews)
"Great hotel!"
United States
Julie
The price is NT$4,177
NT$4,801 total
includes taxes & fees
Aug 23 - Aug 24
Hampton Inn San Diego/Mission Valley

9. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"Verygood breakfast and nice people"
United States
Xiaotong
The price is NT$5,157
NT$5,928 total
includes taxes & fees
Sep 1 - Sep 2
Holiday Inn Express San Diego - SeaWorld Area by IHG

10. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very Good, (2,092 reviews)
"This is a beautiful hotel in a great location."
United States
Robert
The price is NT$4,584
NT$5,270 total
includes taxes & fees
Aug 23 - Aug 24
Best Western Plus Hacienda Hotel Old Town

11. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,696 reviews)
"Great family stay"
United States
Rosalyn
The price is NT$4,623
NT$5,314 total
includes taxes & fees
Aug 30 - Aug 31
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

12. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,169 reviews)
"It was a good stay for the price!"
United States
marissa
The price is NT$3,926
NT$4,512 total
includes taxes & fees
Sep 1 - Sep 2
Wyndham Garden San Diego Near SeaWorld

13. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very Good, (3,671 reviews)
"Perfect hotel for family fun."
United States
Andre
The price is NT$4,613
NT$6,923 total
includes taxes & fees
Aug 23 - Aug 24
Sheraton San Diego Resort

14. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (2,310 reviews)
"Perfect for a family vacation, close to Sea World and places to visit around it."
United States
Alma
The price is NT$3,246
NT$3,731 total
includes taxes & fees
Aug 30 - Aug 31
GreenTree Inn San Diego Mission Bay

15. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
5.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,656 reviews)
"Great place to stay second time going."
United States
Sergio
The price is NT$6,454
NT$7,419 total
includes taxes & fees
Sep 7 - Sep 8
Homewood Suites by Hilton San Diego Airport/Liberty Station

16. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very Good, (2,915 reviews)
"Great place to stay"
United States
Philomena
The price is NT$4,839
NT$5,562 total
includes taxes & fees
Aug 31 - Sep 1
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

17. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (4,011 reviews)
"Room was clean, staff was friendly"
United States
Ronald
The price is NT$3,540
NT$4,069 total
includes taxes & fees
Sep 7 - Sep 8
Comfort Inn Sea World Area

18. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,931 reviews)
"Would stay here again"
United States
Joseph
The price is NT$4,809
NT$5,518 total
includes taxes & fees
Aug 24 - Aug 25
Old Town Inn

19. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,089 reviews)
"Very good hotel at the price with good choice of breakfast."
United States
Tirthankar
The price is NT$4,357
NT$5,008 total
includes taxes & fees
Sep 1 - Sep 2
Holiday Inn Express San Diego Airport - Old Town by IHG

20. Kings Inn San Diego

Kings Inn San Diego
2.5 star property
4.9 km from Mission Bay
8.8 out of 10, Excellent, (3,745 reviews)
"Great place to stay"
United States
Manuel
The price is NT$3,288
NT$3,773 total
includes taxes & fees
Aug 31 - Sep 1
Kings Inn San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Dip your toes in the water at Mission and Pacific Beaches or Ski Beach while you're in Mission Bay. You could also plan a visit to Mission Bay or The Dana On Mission Bay, BW Premier Collection while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, Crown Point Shores and North Cove Beach are also worth a stop.