An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,472 reviews)
"Great place, super convenient for going to sea world"
United States
andrea
The price is NT$5,715
NT$7,486 total
includes taxes & fees
Nov 4 - Nov 5
The Dana on Mission Bay

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,646 reviews)
"Beautiful property, great staff."
United States
Mary
The price is NT$6,991
NT$9,724 total
includes taxes & fees
Oct 28 - Oct 29
San Diego Mission Bay Resort

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,936 reviews)
"Great property and staff was wonderful"
Canada
Jesse
The price is NT$6,575
NT$9,247 total
includes taxes & fees
Nov 8 - Nov 9
Paradise Point Resort & Spa

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,642 reviews)
"Beautiful and the breakfast was delicious!"
United States
Megan
The price is NT$6,481
NT$9,139 total
includes taxes & fees
Nov 5 - Nov 6
Hyatt Regency Mission Bay Spa and Marina

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,413 reviews)
"Clean, convenient and the beds were super comfy!"
United States
Tammy
The price is NT$5,400
NT$6,207 total
includes taxes & fees
Oct 26 - Oct 27
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

6. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
9.0 out of 10, Wonderful, (1,009 reviews)
"Very nice cloae to everything stores, restaurants airport."
United States
Regina
The price is NT$4,565
NT$5,247 total
includes taxes & fees
Nov 10 - Nov 11
Holiday Inn Express San Diego - SeaWorld Area by IHG

7. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (3,073 reviews)
"Clean and spacious room, good breakfast, nice staff."
United States
Antonia
The price is NT$4,376
NT$5,030 total
includes taxes & fees
Oct 14 - Oct 15
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

8. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,736 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is NT$4,423
NT$5,084 total
includes taxes & fees
Nov 8 - Nov 9
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

9. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,533 reviews)
"Nice, clean hotel for a quick stay."
United States
Kristen
The price is NT$4,070
NT$4,679 total
includes taxes & fees
Nov 9 - Nov 10
Hilton Garden Inn San Diego Old Town/SeaWorld Area

10. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 3.5 km from Mission Bay
8.0 out of 10, Very good, (1,636 reviews)
"This place is great if you are looking for something that is not too expensive, is clean, and has a really comfy bed."
United States
Amber
The price is NT$3,459
NT$3,977 total
includes taxes & fees
Nov 1 - Nov 2
La Quinta Inn & Suites by Wyndham San Diego Mission Bay

11. Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.4 out of 10, Very good, (1,402 reviews)
"Great place to stay"
United States
Chris
The price is NT$3,767
NT$4,342 total
includes taxes & fees
Nov 10 - Nov 11
Crowne Plaza San Diego - Mission Valley by IHG

12. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,204 reviews)
"Nice place"
United States
Virginia
The price is NT$3,343
NT$3,842 total
includes taxes & fees
Oct 21 - Oct 22
Wyndham Garden San Diego Near SeaWorld

13. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,415 reviews)
The price is NT$3,594
NT$4,132 total
includes taxes & fees
Oct 19 - Oct 20
GreenTree Inn San Diego Mission Bay

14. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,455 reviews)
"Great would stay again"
United States
Ryan
The price is NT$5,034
NT$7,558 total
includes taxes & fees
Nov 12 - Nov 13
Bahia Resort Hotel

15. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
5.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,706 reviews)
"Amazing place location and hotel staff were amazing."
United States
Orlyn
The price is NT$5,838
NT$6,710 total
includes taxes & fees
Oct 26 - Oct 27
Homewood Suites by Hilton San Diego Airport/Liberty Station

16. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,088 reviews)
"Love the hotel, the breakfast was good and the staff was exceptional."
United States
Patricia
The price is NT$4,884
NT$5,614 total
includes taxes & fees
Oct 26 - Oct 27
Holiday Inn Express San Diego Airport - Old Town by IHG

17. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,731 reviews)
"Love to stay here, very nice accommodations, quiet, great service, the airport shuttle very convenient."
United States
MANUEL
The price is NT$5,209
NT$5,988 total
includes taxes & fees
Nov 9 - Nov 10
Hampton Inn & Suites San Diego Airport Liberty Station

18. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,179 reviews)
"Wonderful place to stay"
United States
shon
The price is NT$4,569
NT$5,251 total
includes taxes & fees
Oct 26 - Oct 27
Best Western Plus Hacienda Hotel Old Town

19. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,036 reviews)
"Have stayed here before and property is always clean and has good breakfast."
United States
Cindy
The price is NT$4,240
NT$4,866 total
includes taxes & fees
Nov 9 - Nov 10
Old Town Inn

20. TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
5.2 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"Such a great place to stay"
United States
Chase
The price is NT$5,612
NT$6,450 total
includes taxes & fees
Nov 8 - Nov 9
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.