Nagasaki Prefecture Cheap Vacations

Book a Cheap Hotel + Flight or Car together to unlock savings

  • Plan, book, travel with confidence

  • payments icon
    Better together
    Save up to NT$5,067 when you book a flight and hotel together*
    lob hotels icon
    Find the right fit
    With over 300,000 hotels worldwide, it's easy to create a perfect package
    lob packages icon
    Rest easy
    Plan, book, and manage your trip all in one place

Top Cheap Nagasaki Prefecture Hotels

Cuore Nagasaki EkiMae
Cuore Nagasaki EkiMae
3 out of 5
7-3 Daikokumachi, Nagasaki, Nagasaki, Kyushu Island
  • 56 min drive from Huis Ten Bosch
Stay at this 3-star business-friendly hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and in-room massages. Our guests praise the helpful staff and ...
8.6/10 Excellent! (1,003 reviews)
"Clean and quiet hotel located opposite the train station. The street is quite noisy, but inside you wouldn't tell as the acoustic insulation is quite good. Room is small but has everything needed for a short stay."

Reviewed on 2025/6/12

Cuore Nagasaki EkiMae
APA Hotel Nagasaki Dejima
APA Hotel Nagasaki Dejima
3 out of 5
8-17 Kabashima-machi, Nagasaki, Nagasaki-ken
  • 57 min drive from Huis Ten Bosch
The price is NT$1,818 per night from Jul 7 to Jul 8
NT$1,818
NT$2,000 total
Jul 7 - Jul 8
Stay at this 3-star hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and a 24-hour front desk. Popular attractions Nagasaki Dejima and Dejima Museum ...
7.6/10 Good! (217 reviews)
"I loved that there was signage in multiple languages."

Reviewed on 2025/4/3

APA Hotel Nagasaki Dejima
S Peria Hotel Nagasaki
S Peria Hotel Nagasaki
3 out of 5
35-5 Goto-cho, Nagasaki, Nagasaki-ken
  • 56 min drive from Huis Ten Bosch
The price is NT$1,420 per night from Jul 13 to Jul 14
NT$1,420
NT$1,562 total
Jul 13 - Jul 14
Stay at this 3-star hotel in Nagasaki. Enjoy free WiFi, parking (surcharge), and a 24-hour front desk. Our guests praise the helpful staff in our reviews. Popular ...
8.4/10 Very Good! (932 reviews)
"This is a well located "business" hotel close to the train station and on a street with several major tram lines. Their breakfast was well prepared and served in a nice sized room - not a massive dining hall. Rooms were typically sized small but with nice amenities."

Reviewed on 2025/4/1

S Peria Hotel Nagasaki
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.