Find Boutique Hotels in San Rafael, CA

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Our top choices for San Rafael boutique hotels

Carneros Resort and Spa

Carneros Resort and Spa
5.0 star property
Napa
9.2 out of 10, Wonderful, (355)
"Excellent hotel!"
United States
Yiting
The price is NT$18,835
NT$24,228 total
includes taxes & fees
Jan 4 - 2026/1/5
Carneros Resort and Spa

MacArthur Place Hotel & Spa

MacArthur Place Hotel & Spa
4.0 star property
Sonoma
9.4 out of 10, Exceptional, (852)
"Lovely hotel! Great facilities, delicious food."
United States
Sara
The price is NT$19,775
NT$24,734 total
includes taxes & fees
Dec 29 - Dec 30
MacArthur Place Hotel & Spa

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2337)
"Great location"
United States
Deborah
The price is NT$3,948
NT$5,757 total
includes taxes & fees
Jan 26 - 2026/1/27
Hotel Zephyr San Francisco

Berkeley City Club

Berkeley City Club
2.5 star property
Telegraph District
8.8 out of 10, Excellent, (697)
"Wonderful, beautiful, old world hotel, right in the heart of bustling Berkeley. "
United States
Peter
Berkeley City Club

Hotel Abri - Union Square

Hotel Abri - Union Square
3.5 star property
Union Square
8.6 out of 10, Excellent, (1002)
"Very nice hotel"
United States
Mariam
The price is NT$3,146
NT$4,960 total
includes taxes & fees
Jan 3 - 2026/1/4
Hotel Abri - Union Square

Palihotel San Francisco

Palihotel San Francisco
3.5 star property
Union Square
8.4 out of 10, Very Good, (631)
"Great vibe here and the rooms and so cute . Excellent bar and bar staff . "
United States
Lana
The price is NT$3,143
NT$4,485 total
includes taxes & fees
Dec 29 - Dec 30
Palihotel San Francisco

Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1001)
"Great place to stay when visiting the City - will return again!"
United States
Chris
The price is NT$3,527
NT$5,409 total
includes taxes & fees
Jan 2 - 2026/1/3
Hotel Emblem San Francisco

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1213)
"Absolutely amazing hotel!"
United States
Alicia
The price is NT$5,052
NT$7,278 total
includes taxes & fees
Jan 26 - 2026/1/27
Argonaut Hotel

The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.0 out of 10, Wonderful, (1128)
"The staff was so fabulous, the hotel is gorgeous, and we are already having the best time!"
United States
Faith
The price is NT$4,389
NT$5,165 total
includes taxes & fees
Jan 3 - 2026/1/4
The Marker Union Square San Francisco

The Barnes San Francisco, Tapestry Collection by Hilton

The Barnes San Francisco, Tapestry Collection by Hilton
4.0 star property
Union Square
8.2 out of 10, Very Good, (774)
"Wonderful Stay, Room was Clean. Close to Union Square. Would Stay Here again. "
United States
Raquel
The price is NT$4,369
NT$5,142 total
includes taxes & fees
Jan 4 - 2026/1/5
The Barnes San Francisco, Tapestry Collection by Hilton
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top San Rafael Hotel Reviews

Frequently asked questions

What's there to see and do in San Rafael?
The shopping, festivals, and restaurants are just some of the things to enjoy while you're in the area. Activities and attractions to experience around San Rafael include Pier 39, San Francisco Bay, and Mission San Rafael Arcangel. You might also want to see spots like Oracle Park, Marin County Civic Center, and Marin County Civic Center Farmers' Market during your trip.
What kind of weather should I plan for when I travel to San Rafael?
Getting an idea of what to expect from the weather in San Rafael will help you enjoy your stay to the fullest. The hottest months are usually September and August with an average temp of 63°F, while the coldest months are January and February with an average of 51°F. Average annual precipitation for San Rafael is 21 inches.
What's the best way to get to my boutique hotel in San Rafael?
You have a few options for getting to San Rafael. The closest major airport is Oakland Intl. Airport (OAK), which is located 25 mi (40.3 km) from the heart of the city. If you'd like to explore around the area, consider renting a car to take in more sights.

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