Find Boutique Hotels in San Rafael, CA

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Check availability on San Rafael Boutique Hotels

Tonight
Dec 22 - Dec 23
Tomorrow
Dec 23 - Dec 24
This weekend
Dec 26 - Dec 28
Next weekend
Jan 2 - Jan 4

Our top choices for San Rafael boutique hotels

Couples treatment rooms, steam room, body treatments, hydrotherapy
Carneros Resort and Spa

Carneros Resort and Spa

Carneros Resort and Spa
5.0 star property
Napa
9.2 out of 10, Wonderful, (355)
"Excellent hotel!"
United States
Yiting
The price is NT$18,912
NT$24,326 total
includes taxes & fees
Jan 1 - 2026/1/2
Carneros Resort and Spa
Courtyard
Hotel Zephyr San Francisco

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2337)
"Great decor and really great location"
United States
Jose
The price is NT$4,213
NT$6,072 total
includes taxes & fees
Jan 8 - 2026/1/9
Hotel Zephyr San Francisco
Breakfast, lunch, dinner served; Mediterranean cuisine, garden views
MacArthur Place Hotel & Spa

MacArthur Place Hotel & Spa

MacArthur Place Hotel & Spa
4.0 star property
Sonoma
9.4 out of 10, Exceptional, (852)
"Lovely hotel! Great facilities, delicious food."
United States
Sara
The price is NT$19,842
NT$24,818 total
includes taxes & fees
Dec 28 - Dec 29
MacArthur Place Hotel & Spa
Premium bedding, in-room safe, desk, laptop workspace
Hotel Abri - Union Square

Hotel Abri - Union Square

Hotel Abri - Union Square
3.5 star property
Union Square
8.6 out of 10, Excellent, (1003)
"Very nice hotel"
United States
Mariam
The price is NT$3,157
NT$4,977 total
includes taxes & fees
Jan 2 - 2026/1/3
Hotel Abri - Union Square
Indoor pool
Berkeley City Club

Berkeley City Club

Berkeley City Club
2.5 star property
Telegraph District
8.8 out of 10, Excellent, (696)
"Wonderful, beautiful, old world hotel, right in the heart of bustling Berkeley. "
United States
Peter
Berkeley City Club
Cocktail bar
Hotel Emblem San Francisco

Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1003)
"Great place to stay when visiting the City - will return again!"
United States
Chris
The price is NT$3,541
NT$5,431 total
includes taxes & fees
Jan 2 - 2026/1/3
Hotel Emblem San Francisco
Lobby
The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1003)
"cleanliness,good service, convenient location"
United States
Harry
The price is NT$4,668
NT$6,803 total
includes taxes & fees
Dec 27 - Dec 28
The Clancy, Autograph Collection by Marriott
City view
Argonaut Hotel

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1206)
"Absolutely amazing hotel!"
United States
Alicia
The price is NT$6,407
NT$8,878 total
includes taxes & fees
Jan 19 - 2026/1/20
Argonaut Hotel
55-inch TV with digital channels, pay movies
The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1368)
"Staff was amazing. The rooms felt clean and the hotel was very well maintained."
United States
Misty
The price is NT$4,005
NT$5,945 total
includes taxes & fees
Dec 24 - Dec 25
The Clift Royal Sonesta San Francisco
Dinner served
The Barnes San Francisco, Tapestry Collection by Hilton

The Barnes San Francisco, Tapestry Collection by Hilton

The Barnes San Francisco, Tapestry Collection by Hilton
4.0 star property
Union Square
8.2 out of 10, Very Good, (767)
"Great location, friendly staff."
Canada
Lucy
The price is NT$4,138
NT$4,871 total
includes taxes & fees
Dec 24 - Dec 25
The Barnes San Francisco, Tapestry Collection by Hilton
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top San Rafael Hotel Reviews

Handlery Union Square Hotel

Handlery Union Square Hotel

10/10 Excellent
"Very friendly staff. "
Susan 1-night trip
Posted 5 hours ago
Handlery Union Square Hotel

Frequently asked questions

What's there to see and do in San Rafael?
The shopping, festivals, and restaurants are just some of the things to enjoy while you're in the area. While you're out and about in San Rafael, popular attractions like Pier 39, Oracle Park, and Chase Center are worth a visit. You might also like to explore more of the area and take in additional sights like San Francisco Bay, Mission San Rafael Arcangel, and Marin County Civic Center while you're here.
What kind of weather should I plan for when I travel to San Rafael?
Getting an idea of what to expect from the weather in San Rafael will help you enjoy your stay to the fullest. The hottest months are usually September and August with an average temp of 63°F, while the coldest months are January and February with an average of 51°F. Average annual precipitation for San Rafael is 21 inches.
What's the best way to get to my boutique hotel in San Rafael?
You have a few options for getting to San Rafael. The closest major airport is Oakland Intl. Airport (OAK), which is located 25 mi (40.3 km) from the heart of the city. If you'd like to explore around the area, consider renting a car to take in more sights.

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