The Golden Gate Bridge at dusk with city lights in the background.

Find Boutique Hotels in San Rafael, CA

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Check availability on San Rafael Boutique Hotels

Tonight
Sep 23 - Sep 24
Tomorrow
Sep 24 - Sep 25
This weekend
Sep 25 - Sep 27
Next weekend
Oct 2 - Oct 4

Our top choices for San Rafael boutique hotels

A modern house with a large glass facade, outdoor seating area, and a swimming pool.
A sunlit room with large windows, a gray sofa, a small table, and a potted plant.
A spacious indoor area with a wooden ceiling, large windows, and a staircase.
A large, white, two-story house with a red roof, multiple windows, and a well-maintained lawn.

1. Cavallo Point

Cavallo Point
Sausalito
United States
Josh
NT$18,892
NT$23,733 total
includes taxes & fees
Oct 4 - Oct 5
Cavallo Point
A hotel courtyard with outdoor seating, a fire pit, and a vintage camper parked nearby.
A modern outdoor seating area with a fire pit, orange chairs, and a view of the cityscape.
A person reclining in a circular seating area with a plant and a colorful mural in the background.
A circular mirror reflecting a modern lounge area with sofas, a coffee table, and a vase with flowers.

2. Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
Fisherman's Wharf
Australia
Cole
NT$6,491
NT$8,946 total
includes taxes & fees
Oct 24 - Oct 25
Hotel Zephyr San Francisco
An outdoor cafe with brick walls, outdoor seating, and a tree in the foreground.
A room with a large window overlooking a harbor, featuring a sailboat and a building with multiple stories.
A bar area with three black barstools, a wooden counter, and a shelf stocked with liquor bottles.
A spacious bar area with high wooden beams, a brick wall, and a variety of seating options including bar stools and tables.

3. Argonaut Hotel

Argonaut Hotel
Fisherman's Wharf
United States
Michelle
NT$8,227
NT$11,065 total
includes taxes & fees
Oct 4 - Oct 5
Argonaut Hotel
A spacious lobby with a reception desk, seating area, and a staircase leading to an upper level.
A modern interior with a central seating area, a large chandelier, and a wall with framed artwork.
A bar area with a long counter, multiple shelves of liquor bottles, and several chairs.
A building with a café named Café de la Presse, a street sign for Grant Street, and a neon sign for TRIP 10.

4. Hotel Triton Union Square San Francisco

Hotel Triton Union Square San Francisco
Union Square
United States
Maria
NT$3,644
NT$5,670 total
includes taxes & fees
Oct 17 - Oct 18
Hotel Triton Union Square San Francisco
A spacious lobby with a staircase, comfortable seating areas, and large windows offering views of the city.
A modern building with a prominent entrance and a sign that reads "THE CLANCY".
An outdoor seating area with round tables and chairs, a fire feature, and string lights.
A spacious lobby with a modern bar area, seating arrangements, and a geometric wall design.

5. The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
Downtown San Francisco
Canada
Samantha
NT$5,516
NT$7,917 total
includes taxes & fees
Oct 23 - Oct 24
The Clancy, Autograph Collection by Marriott
A modern hotel room with a grey sofa, a dining table, a TV, and a large window with curtains.
A spacious room with large windows, two armchairs, a small table with books, and a lamp.
A modern hotel room with a dining area, a fireplace, a sofa set, and large windows offering city views.
A spacious hotel lobby with large windows, wooden beams, and a central bar area.

6. The Clift Royal Sonesta San Francisco

The Clift Royal Sonesta San Francisco
Union Square
United States
Jalicia
NT$6,630
NT$9,040 total
includes taxes & fees
Oct 3 - Oct 4
The Clift Royal Sonesta San Francisco
A modern bar area with a long wooden counter, multiple bar stools, and a variety of bottles and glasses.
A modern lounge area with a long table, multiple chairs, and a television screen displaying a fire.
A cozy reading nook with a stack of books, a teal sofa, and a floor lamp.
A modern living room with a sofa, armchairs, a glass coffee table, a bookshelf, and a large abstract painting.

7. Hotel Emblem San Francisco

Hotel Emblem San Francisco
Union Square
United States
Keegan
NT$4,873
NT$7,004 total
includes taxes & fees
Oct 23 - Oct 24
Hotel Emblem San Francisco
A modern living room with a large window overlooking a bridge, a flat-screen TV, a clock, and a brown leather sofa.
A cozy hotel lobby with a fireplace, two tables with teapots, and comfortable seating.
A room with large windows overlooking a bridge and a body of water.

8. Harbor Court Hotel

Harbor Court Hotel
Downtown San Francisco
Canada
Yoojin
NT$6,103
NT$8,714 total
includes taxes & fees
Oct 18 - Oct 19
Harbor Court Hotel
A grand lobby with high ceilings, chandeliers, and a fireplace.
A hallway with a Christmas tree and nutcracker statues.
A grand lobby with a checkered floor, a blue sofa, and a chandelier.
A person with a suitcase at the entrance of a building with a blue wall and a decorative door.

9. The Marker Union Square San Francisco

The Marker Union Square San Francisco
Union Square
United States
Sophia
NT$5,666
NT$6,669 total
includes taxes & fees
Oct 16 - Oct 17
The Marker Union Square San Francisco
A courtyard with a stone pathway, outdoor seating, and potted plants.
A spacious lobby with wooden floors, modern furniture, and large windows allowing natural light.
A spacious lounge area with leather chairs, a coffee table, and a bar in the background.
A modern interior with a large wooden panel wall, a reception desk, and a seating area with a small table and chairs.

10. Hotel Kabuki, part of JdV by Hyatt

Hotel Kabuki, part of JdV by Hyatt
Western Addition
Canada
frank
NT$7,994
NT$10,604 total
includes taxes & fees
Oct 18 - Oct 19
Hotel Kabuki, part of JdV by Hyatt
View all properties

Top San Rafael Hotel Reviews

Stanford Court San Francisco

Stanford Court San Francisco

10/10 Excellent
"Great location!!! I’d stay here again"
Misty 3-night trip
Posted 7 hours ago
Stanford Court San Francisco
Chancellor Hotel on Union Square

Chancellor Hotel on Union Square

10/10 Excellent
"Great location and the room was super clean and the bed was very comfortable. Staff and parking was very accommodating. Definitely a repeat."
Margaret 1-night trip
Posted 7 hours ago
Chancellor Hotel on Union Square
Handlery Union Square Hotel

Handlery Union Square Hotel

10/10 Excellent
"Itwas great having Valet parking. The staff were helpful in sharing what was near to do and where to go to be safe."
Lynn 1-night trip
Posted 13 hours ago
Handlery Union Square Hotel
Hyatt Regency San Francisco Downtown SOMA

Hyatt Regency San Francisco Downtown SOMA

10/10 Excellent
"Clean room . Helpful and knowledgeable staff. Great location."
ANALIZA 1-night trip
Posted 2 days ago
Hyatt Regency San Francisco Downtown SOMA

Frequently asked questions

What's there to see and do in San Rafael?
The shopping, festivals, and restaurants are just some of the things to enjoy while you're in the area. While you're out and about in San Rafael, popular attractions like Muir Woods National Monument, Pier 39, and Oracle Park are worth a visit. You might also want to see spots like Chase Center, San Francisco Bay, and Mission San Rafael Arcangel during your trip.
What kind of weather should I plan for when I travel to San Rafael?
Getting an idea of what to expect from the weather in San Rafael will help you enjoy your stay to the fullest. The hottest months are usually September and August with an average temp of 63°F, while the coldest months are January and February with an average of 51°F. Average annual precipitation for San Rafael is 21 inches.
What's the best way to get to my boutique hotel in San Rafael?
You have a few options for getting to San Rafael. The closest major airport is Oakland Intl. Airport (OAK), which is located 25 mi (40.3 km) from the heart of the city. If you'd like to explore around the area, consider renting a car to take in more sights.

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