An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,491 reviews)
"Wonderful staff, nice amenities, good food, beautiful view!"
United States
Steven
The price is NT$5,180
NT$6,901 total
includes taxes & fees
Dec 10 - Dec 11
The Dana on Mission Bay

2. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,642 reviews)
"Beautiful and the breakfast was delicious!"
United States
Megan
The price is NT$5,649
NT$8,232 total
includes taxes & fees
Dec 1 - Dec 2
Hyatt Regency Mission Bay Spa and Marina

3. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,675 reviews)
"Amazing rooms and service!!"
United States
Aaroosh
The price is NT$6,211
NT$8,877 total
includes taxes & fees
Nov 29 - Nov 30
San Diego Mission Bay Resort

4. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,977 reviews)
"Loved staying at Paradise Point!"
United States
victor
The price is NT$6,546
NT$9,263 total
includes taxes & fees
Dec 13 - Dec 14
Paradise Point Resort & Spa

5. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"Would stay again, my kids enjoyed the room . Hotel it close to lots of restaurants and sea worlds , minutes away from mission beach ."
United States
Jose
The price is NT$3,911
NT$4,495 total
includes taxes & fees
Dec 13 - Dec 14
Holiday Inn Express San Diego - SeaWorld Area by IHG

6. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,489 reviews)
"The breakfast was amazing!"
United States
David
The price is NT$4,453
NT$5,118 total
includes taxes & fees
Nov 19 - Nov 20
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

7. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,754 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is NT$4,665
NT$5,362 total
includes taxes & fees
Dec 1 - Dec 2
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

8. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (3,106 reviews)
"Clean and spacious room, good breakfast, nice staff."
United States
Antonia
The price is NT$4,202
NT$4,830 total
includes taxes & fees
Dec 2 - Dec 3
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

9. Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.4 out of 10, Very good, (1,505 reviews)
"Had a good stay"
United States
Yesenia
The price is NT$3,615
NT$4,167 total
includes taxes & fees
Nov 16 - Nov 17
Crowne Plaza San Diego - Mission Valley by IHG

10. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,824 reviews)
"Great location, quiet, great breakfast , would stay there again."
United States
Blake Douglas
The price is NT$4,162
NT$4,784 total
includes taxes & fees
Nov 19 - Nov 20
Hampton Inn San Diego/Mission Valley

11. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,457 reviews)
"Great stay!"
United States
Arman
The price is NT$3,434
NT$3,947 total
includes taxes & fees
Nov 17 - Nov 18
GreenTree Inn San Diego Mission Bay

12. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,528 reviews)
"Great getaway place near the pier"
United States
Hector
The price is NT$4,578
NT$7,087 total
includes taxes & fees
Nov 15 - Nov 16
Bahia Resort Hotel

13. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
5.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,708 reviews)
"Very pleasant stay."
United States
Alicia
The price is NT$5,901
NT$6,783 total
includes taxes & fees
Nov 30 - Dec 1
Homewood Suites by Hilton San Diego Airport/Liberty Station

14. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,740 reviews)
"Very clean property and helpful, friendly staff."
United States
Dean
The price is NT$5,149
NT$5,918 total
includes taxes & fees
Nov 22 - Nov 23
Hampton Inn & Suites San Diego Airport Liberty Station

15. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,097 reviews)
"Great family hotel. Simple and clean yummy breakfast inexpensive and perfect for our short stay in sd"
United States
Alejandra
The price is NT$4,481
NT$5,150 total
includes taxes & fees
Nov 17 - Nov 18
Holiday Inn Express San Diego Airport - Old Town by IHG

16. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,179 reviews)
"great stay"
United States
Sarah
The price is NT$3,152
NT$3,623 total
includes taxes & fees
Nov 19 - Nov 20
Wyndham Garden San Diego Near SeaWorld

17. Comfort Inn San Diego - SeaWorld Area

Comfort Inn San Diego - SeaWorld Area
3.5 star property
2.8 km from Mission Bay
8.6 out of 10, Excellent, (4,318 reviews)
"Staff was very friendly, rooms were gorgeous and clean, and breakfast was a hit! Definitely staying here again in the next San Diego trip!"
United States
Luis
The price is NT$3,352
NT$3,853 total
includes taxes & fees
Dec 6 - Dec 7
Comfort Inn San Diego - SeaWorld Area

18. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,053 reviews)
"Wonderful place to stay!!"
Canada
Anne
The price is NT$4,473
NT$5,132 total
includes taxes & fees
Nov 29 - Nov 30
Old Town Inn

19. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,202 reviews)
"Great Place!"
United States
Erick
The price is NT$4,270
NT$4,908 total
includes taxes & fees
Nov 17 - Nov 18
Best Western Plus Hacienda Hotel Old Town

20. Hampton Inn San Diego-Kearny Mesa

Hampton Inn San Diego-Kearny Mesa
2.5 star property
9.9 km from Mission Bay
9.2 out of 10, Wonderful, (1,013 reviews)
"Fantastic hotel with very friendly staff"
United States
Jeffrey
The price is NT$3,613
NT$4,145 total
includes taxes & fees
Dec 11 - Dec 12
Hampton Inn San Diego-Kearny Mesa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels in Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet friendly
WiFi included
A pool area with a hot tub, lounge chairs, and umbrellas.
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,491 reviews
View
An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,977 reviews
View
A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.
San Diego Mission Bay Resort
4.0 star property
8.6
Excellent
1,675 reviews
View
A resort pool with a lazy river, palm trees, and a view of the ocean.
Hyatt Regency Mission Bay Spa and Marina
4.0 star property
8.4
Very good
1,642 reviews
View
A beach view with a palm tree, a covered area with people, and a building with a sloped roof.
The Beach Cottages
2.5 star property
9.4
Exceptional
1,000 reviews
View

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Point Loma

This seaside hilly peninsula offers marine recreation, yachting, and whale watching. Explore Cabrillo National Monument, Old Point Loma Lighthouse, and Sunset Cliffs Natural Park. Enjoy local shops and eateries at Liberty Station and Point Loma Village.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.